RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 DHPSP49366 369 aaPredicted RBP16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 ENPEPQ07075 957 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 BYSLQ13895 437 aaKnown RBP16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 ANO4Q32M45 955 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 C1orf220Q5T0J3 134 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 LPCAT2Q7L5N7 544 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 NAT16Q8N8M0 369 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 C12orf29Q8N999 325 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 TERB1Q8NA31 727 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 CCDC150Q8NCX0 1101 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 HMGB4Q8WW32 186 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 HNRNPABQ99729 332 aaKnown RBP16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 PRR14Q9BWN1 585 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 NT5C1AQ9BXI3 368 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 NIF3L1Q9GZT8 377 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 CYP3A43Q9HB55 503 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 PNPLA8Q9NP80 782 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 CYLDQ9NQC7 956 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 LSM7Q9UK45 103 aaKnown RBP16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 ANGPTL2Q9UKU9 493 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 SCML2Q9UQR0 700 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 PCDHA5Q9Y5H7 936 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 PLXND1Q9Y4D7 1925 aa16.04■□□□□ 0.16
DEPDC7-204ENST00000532078 ABCA7Q8IZY2 2146 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 FAM237AA0A1B0GTK4 181 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 TCRBV21S2A2A0A5A6 115 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 KHNYNO15037 678 aaKnown RBP16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 CYP26A1O43174 497 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 ADAM23O75077 832 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 TRIM49P0CI25 452 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 TRIM49CP0CI26 452 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 RPL13P26373 211 aaKnown RBP16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 ATP5C1P36542 298 aaKnown RBP16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 GCLMP48507 274 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 NDUFA8P51970 172 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 C10orf76Q5T2E6 689 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 N4BP2L1Q5TBK1 243 aaPredicted RBP16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 EMC10Q5UCC4 262 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 DAB2IPQ5VWQ8 1189 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 GRAMD4Q6IC98 578 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 CLEC20AQ6ZU45 233 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 HTR3DQ70Z44 454 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 GPRIN1Q7Z2K8 1008 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 TMEM25Q86YD3 366 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 FAM186BQ8IYM0 893 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 ZNF513Q8N8E2 541 aaPredicted RBP16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 JAKMIP2Q96AA8 810 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.03■□□□□ 0.166e-6■■■■■ 48.1
DEPDC7-204ENST00000532078 USP24Q9UPU5 2620 aa16.03■□□□□ 0.16
DEPDC7-204ENST00000532078 KCNK5O95279 499 aa16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 ACO1P21399 889 aaKnown RBP16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 PMLP29590 882 aa16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 PSMC2P35998 433 aaKnown RBP16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 PGFP49763 221 aa16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 DPYDQ12882 1025 aa16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 PGBD3Q8N328 593 aa16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 GUF1Q8N442 669 aaKnown RBP16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 TAS1R2Q8TE23 839 aa16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 RLN3Q8WXF3 142 aa16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 WBP2Q969T9 261 aa16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 CYFIP2Q96F07 1278 aa16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 TWNKQ96RR1 684 aa16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 KLF16Q9BXK1 252 aaPredicted RBP16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 APOBEC3GQ9HC16 384 aaKnown RBP16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 ZDHHC4Q9NPG8 344 aa16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 TMEM9BQ9NQ34 198 aa16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 DNAJC17Q9NVM6 304 aaKnown RBP16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 ATP6V1DQ9Y5K8 247 aa16.02■□□□□ 0.16
DEPDC7-204ENST00000532078 C4orf47A7E2U8 309 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 HHLA1C9JL84 531 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 NEDD8-MDP1E9PL57 170 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 CACNG3O60359 315 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 GREM1O60565 184 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 CILPO75339 1184 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 TBX18O95935 607 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 HOXB2P14652 356 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 CD58P19256 250 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 DPP6P42658 865 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 PPP3CAQ08209 521 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 ST3GAL2Q16842 350 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 SPDYCQ5MJ68 293 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 PSAPL1Q6NUJ1 521 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 KLHDC10Q6PID8 442 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 KRBA2Q6ZNG9 492 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 TADA2BQ86TJ2 420 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 PIGKQ92643 395 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 CHAMP1Q96JM3 812 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 XPO6Q96QU8 1125 aaKnown RBP16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 BBS2Q9BXC9 721 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 SCAND2PQ9GZW5 306 aaPredicted RBP16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 MMRN2Q9H8L6 949 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 TMEM8AQ9HCN3 771 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 MARK1Q9P0L2 795 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 WDR35Q9P2L0 1181 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 EVLQ9UI08 416 aaPredicted RBP16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 DNMT3LQ9UJW3 386 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 MAPK8IP1Q9UQF2 711 aa16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 TNRC6BQ9UPQ9 1833 aaKnown RBP16.01■□□□□ 0.15
DEPDC7-204ENST00000532078 A0A1W2PQ27 194 aa16■□□□□ 0.15
DEPDC7-204ENST00000532078 A0A1W2PQ64 194 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms