RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 WDR35Q9P2L0 1181 aa23.31■■□□□ 1.32
LRRK1-208ENST00000532029 ADAMTS1Q9UHI8 967 aa23.31■■□□□ 1.32
LRRK1-208ENST00000532029 SORCS3Q9UPU3 1222 aa23.31■■□□□ 1.32
LRRK1-208ENST00000532029 LEFTY2O00292 366 aa23.3■■□□□ 1.32
LRRK1-208ENST00000532029 TCF3P15923 654 aa23.3■■□□□ 1.32
LRRK1-208ENST00000532029 SCNN1AP37088 669 aa23.3■■□□□ 1.32
LRRK1-208ENST00000532029 EIF4A3P38919 411 aaKnown RBP23.3■■□□□ 1.32
LRRK1-208ENST00000532029 C1QBPQ07021 282 aaKnown RBP23.3■■□□□ 1.32
LRRK1-208ENST00000532029 USP4Q13107 963 aa23.3■■□□□ 1.32
LRRK1-208ENST00000532029 GRM2Q14416 872 aa23.3■■□□□ 1.32
LRRK1-208ENST00000532029 TAF5Q15542 800 aa23.3■■□□□ 1.32
LRRK1-208ENST00000532029 CC2D1AQ6P1N0 951 aaPredicted RBP23.3■■□□□ 1.32
LRRK1-208ENST00000532029 MON1BQ7L1V2 547 aa23.3■■□□□ 1.32
LRRK1-208ENST00000532029 TC2NQ8N9U0 490 aa23.3■■□□□ 1.32
LRRK1-208ENST00000532029 SPC24Q8NBT2 197 aa23.3■■□□□ 1.32
LRRK1-208ENST00000532029 TRMT61BQ9BVS5 477 aaKnown RBP23.3■■□□□ 1.32
LRRK1-208ENST00000532029 TAS2R14Q9NYV8 317 aa23.3■■□□□ 1.32
LRRK1-208ENST00000532029 CFAP97Q9P2B7 532 aa23.3■■□□□ 1.32
LRRK1-208ENST00000532029 IMPACTQ9P2X3 320 aa23.3■■□□□ 1.32
LRRK1-208ENST00000532029 NAALADL1Q9UQQ1 740 aa23.3■■□□□ 1.32
LRRK1-208ENST00000532029 RTN2O75298 545 aa23.29■■□□□ 1.32
LRRK1-208ENST00000532029 GRAP2O75791 330 aa23.29■■□□□ 1.32
LRRK1-208ENST00000532029 IRF1P10914 325 aa23.29■■□□□ 1.32
LRRK1-208ENST00000532029 COG7P83436 770 aa23.29■■□□□ 1.32
LRRK1-208ENST00000532029 PTP4A2Q12974 167 aa23.29■■□□□ 1.32
LRRK1-208ENST00000532029 MTF1Q14872 753 aa23.29■■□□□ 1.32
LRRK1-208ENST00000532029 ZNF77Q15935 545 aa23.29■■□□□ 1.32
LRRK1-208ENST00000532029 MSANTD2Q6P1R3 559 aa23.29■■□□□ 1.32
LRRK1-208ENST00000532029 PHLDB2Q86SQ0 1253 aa23.29■■□□□ 1.32
LRRK1-208ENST00000532029 KLF16Q9BXK1 252 aaPredicted RBP23.29■■□□□ 1.32
LRRK1-208ENST00000532029 GKN1Q9NS71 199 aa23.29■■□□□ 1.32
LRRK1-208ENST00000532029 SH3BP1Q9Y3L3 701 aa23.29■■□□□ 1.32
LRRK1-208ENST00000532029 SSU72P8A0A1W2PR75 194 aa23.28■■□□□ 1.32
LRRK1-208ENST00000532029 SLC12A8A0AV02 714 aa23.28■■□□□ 1.32
LRRK1-208ENST00000532029 DAB1O75553 588 aa23.28■■□□□ 1.32
LRRK1-208ENST00000532029 FYNP06241 537 aa23.28■■□□□ 1.32
LRRK1-208ENST00000532029 GDI1P31150 447 aa23.28■■□□□ 1.32
LRRK1-208ENST00000532029 RNASE9P60153 205 aaKnown RBP23.28■■□□□ 1.32
LRRK1-208ENST00000532029 CDK17Q00537 523 aa23.28■■□□□ 1.32
LRRK1-208ENST00000532029 MAPK8IP2Q13387 824 aaPredicted RBP23.28■■□□□ 1.32
LRRK1-208ENST00000532029 ARHGAP29Q52LW3 1261 aa23.28■■□□□ 1.32
LRRK1-208ENST00000532029 MCOLN2Q8IZK6 566 aa23.28■■□□□ 1.32
LRRK1-208ENST00000532029 DEFB106AQ8N104 65 aa23.28■■□□□ 1.32
LRRK1-208ENST00000532029 VCPIP1Q96JH7 1222 aa23.28■■□□□ 1.32
LRRK1-208ENST00000532029 ZFRQ96KR1 1074 aaKnown RBP23.28■■□□□ 1.32
LRRK1-208ENST00000532029 LRRC3BQ96PB8 259 aa23.28■■□□□ 1.32
LRRK1-208ENST00000532029 SLC2A13Q96QE2 648 aa23.28■■□□□ 1.32
LRRK1-208ENST00000532029 SFMBT1Q9UHJ3 866 aa23.28■■□□□ 1.32
LRRK1-208ENST00000532029 MUTYHQ9UIF7 546 aa23.28■■□□□ 1.32
LRRK1-208ENST00000532029 ZNF263O14978 683 aa23.27■■□□□ 1.32
LRRK1-208ENST00000532029 AKR1B10O60218 316 aa23.27■■□□□ 1.32
LRRK1-208ENST00000532029 FTLP02792 175 aaPredicted RBP23.27■■□□□ 1.32
LRRK1-208ENST00000532029 ZXDBP98169 803 aa23.27■■□□□ 1.32
LRRK1-208ENST00000532029 FCHO2Q0JRZ9 810 aa23.27■■□□□ 1.32
LRRK1-208ENST00000532029 DCAF6Q58WW2 860 aa23.27■■□□□ 1.32
LRRK1-208ENST00000532029 SYPL2Q5VXT5 272 aa23.27■■□□□ 1.32
LRRK1-208ENST00000532029 DQX1Q8TE96 717 aaKnown RBP23.27■■□□□ 1.32
LRRK1-208ENST00000532029 TRIM11Q96F44 468 aa23.27■■□□□ 1.32
LRRK1-208ENST00000532029 CCDC42Q96M95 316 aa23.27■■□□□ 1.32
LRRK1-208ENST00000532029 CHP1Q99653 195 aa23.27■■□□□ 1.32
LRRK1-208ENST00000532029 SELENOOQ9BVL4 669 aa23.27■■□□□ 1.32
LRRK1-208ENST00000532029 BRD9Q9H8M2 597 aa23.27■■□□□ 1.32
LRRK1-208ENST00000532029 METTL5Q9NRN9 209 aaKnown RBP23.27■■□□□ 1.32
LRRK1-208ENST00000532029 LSM7Q9UK45 103 aaKnown RBP23.27■■□□□ 1.32
LRRK1-208ENST00000532029 HBS1LQ9Y450 684 aaKnown RBP23.27■■□□□ 1.32
LRRK1-208ENST00000532029 A0A087X0T9 212 aa23.26■■□□□ 1.31
LRRK1-208ENST00000532029 HMBSP08397 361 aa23.26■■□□□ 1.31
LRRK1-208ENST00000532029 FAM228BP0C875 321 aa23.26■■□□□ 1.31
LRRK1-208ENST00000532029 SRFP11831 508 aa23.26■■□□□ 1.31
LRRK1-208ENST00000532029 KPNA1P52294 538 aaPredicted RBP23.26■■□□□ 1.31
LRRK1-208ENST00000532029 GSCP56915 257 aaPredicted RBP23.26■■□□□ 1.31
LRRK1-208ENST00000532029 CCDC122Q5T0U0 273 aa23.26■■□□□ 1.31
LRRK1-208ENST00000532029 DNAJC24Q6P3W2 148 aa23.26■■□□□ 1.31
LRRK1-208ENST00000532029 KHSRPQ92945 711 aaKnown RBP eCLIP23.26■■□□□ 1.31
LRRK1-208ENST00000532029 SERPINB11Q96P15 392 aa23.26■■□□□ 1.31
LRRK1-208ENST00000532029 PANX2Q96RD6 677 aa23.26■■□□□ 1.31
LRRK1-208ENST00000532029 SMOC2Q9H3U7 446 aa23.26■■□□□ 1.31
LRRK1-208ENST00000532029 NHEJ1Q9H9Q4 299 aaPredicted RBP23.26■■□□□ 1.31
LRRK1-208ENST00000532029 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.26■■□□□ 1.31
LRRK1-208ENST00000532029 DUSP12Q9UNI6 340 aa23.26■■□□□ 1.31
LRRK1-208ENST00000532029 HELZP42694 1942 aaKnown RBP23.25■■□□□ 1.31
LRRK1-208ENST00000532029 C5orf42Q9H799 3197 aa23.25■■□□□ 1.31
LRRK1-208ENST00000532029 E2F8A0AVK6 867 aa23.25■■□□□ 1.31
LRRK1-208ENST00000532029 CHADO15335 359 aa23.25■■□□□ 1.31
LRRK1-208ENST00000532029 NARSO43776 548 aaKnown RBP23.25■■□□□ 1.31
LRRK1-208ENST00000532029 NOS2P35228 1153 aa23.25■■□□□ 1.31
LRRK1-208ENST00000532029 MATKP42679 507 aa23.25■■□□□ 1.31
LRRK1-208ENST00000532029 IFNAR2P48551 515 aa23.25■■□□□ 1.31
LRRK1-208ENST00000532029 MRE11P49959 708 aa23.25■■□□□ 1.31
LRRK1-208ENST00000532029 GPC5P78333 572 aa23.25■■□□□ 1.31
LRRK1-208ENST00000532029 SLC18A3Q16572 532 aa23.25■■□□□ 1.31
LRRK1-208ENST00000532029 ALKBH5Q6P6C2 394 aaKnown RBP23.25■■□□□ 1.31
LRRK1-208ENST00000532029 UBALD2Q8IYN6 164 aa23.25■■□□□ 1.31
LRRK1-208ENST00000532029 KIAA1958Q8N8K9 716 aa23.25■■□□□ 1.31
LRRK1-208ENST00000532029 C3orf20Q8ND61 904 aa23.25■■□□□ 1.31
LRRK1-208ENST00000532029 RIN3Q8TB24 985 aa23.25■■□□□ 1.31
LRRK1-208ENST00000532029 IRF7Q92985 503 aa23.25■■□□□ 1.31
LRRK1-208ENST00000532029 ISCUQ9H1K1 167 aa23.25■■□□□ 1.31
LRRK1-208ENST00000532029 DUS2Q9NX74 493 aaKnown RBP23.25■■□□□ 1.31
LRRK1-208ENST00000532029 RRN3Q9NYV6 651 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms