RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 TLE2Q04725 743 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 TCF15Q12870 199 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 ARHGEF7Q14155 803 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 EZH2Q15910 746 aaKnown RBP5.04□□□□□ -1.6
USP47-211ENST00000531513 TRIM71Q2Q1W2 868 aaKnown RBP5.04□□□□□ -1.6
USP47-211ENST00000531513 NBPF8Q3BBV2 869 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.04□□□□□ -1.6
USP47-211ENST00000531513 RAP1GAP2Q684P5 730 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 FCRL6Q6DN72 434 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 PDILTQ8N807 584 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 PCYOX1LQ8NBM8 494 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 FAM46DQ8NEK8 389 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 OR1N1Q8NGS0 311 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 RAPGEF4Q8WZA2 1011 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 HERVK_113Q902F9 699 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 RILPL2Q969X0 211 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 KLHL32Q96NJ5 620 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 DDX23Q9BUQ8 820 aaKnown RBP5.04□□□□□ -1.6
USP47-211ENST00000531513 OSBPL5Q9H0X9 879 aaPredicted RBP5.04□□□□□ -1.6
USP47-211ENST00000531513 ZSCAN32Q9NX65 697 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 CTTNBP2NLQ9P2B4 639 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 DKK4Q9UBT3 224 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 FEM1BQ9UK73 627 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 TBC1D30Q9Y2I9 924 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 DTNAQ9Y4J8 743 aa5.04□□□□□ -1.6
USP47-211ENST00000531513 PRAMEF33A0A0G2JMD5 474 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 HMX3A6NHT5 357 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 B4E171 279 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 ADM5C9JUS6 153 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 FCHO1O14526 889 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 CCP110O43303 1012 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 PRAMEF10O60809 474 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 SOAT2O75908 522 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 ACTL6BO94805 426 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 BAIAP3O94812 1187 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 GLP2RO95838 553 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 PRKCGP05129 697 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 TPH1P17752 444 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 VIPR2P41587 438 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 TSPAN7P41732 249 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 PDE1CQ14123 709 aaPredicted RBP5.03□□□□□ -1.6
USP47-211ENST00000531513 SRSF7Q16629 238 aaKnown RBP eCLIP5.03□□□□□ -1.6
USP47-211ENST00000531513 INSCQ1MX18 579 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 SLC5A9Q2M3M2 681 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 FCRLBQ6BAA4 426 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 TMPRSS9Q7Z410 1059 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 PPP1R32Q7Z5V6 425 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 GAS2L3Q86XJ1 694 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 C2CD5Q86YS7 1000 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 SLC44A2Q8IWA5 706 aaPredicted RBP5.03□□□□□ -1.6
USP47-211ENST00000531513 CCDC28AQ8IWP9 274 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 PDPRQ8NCN5 879 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 SLC17A8Q8NDX2 589 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 TMIEQ8NEW7 156 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 TOR1AIP2Q8NFQ8 470 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 SDCCAG3Q96C92 435 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 MOGAT1Q96PD6 335 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 PPP1R9BQ96SB3 815 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 PABPC3Q9H361 631 aaKnown RBP5.03□□□□□ -1.6
USP47-211ENST00000531513 TP63Q9H3D4 680 aaPredicted RBP5.03□□□□□ -1.6
USP47-211ENST00000531513 ADAM21Q9UKJ8 722 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 CA14Q9ULX7 337 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 CDYLQ9Y232 598 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 WNT6Q9Y6F9 365 aa5.03□□□□□ -1.6
USP47-211ENST00000531513 LINC00473A8K010 186 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 COQ9O75208 318 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 KIF20AO95235 890 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 NTSR2O95665 410 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 CHRM2P08172 466 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 KCNA2P16389 499 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 GATA3P23771 443 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 ATICP31939 592 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 KRTAP10-7P60409 375 aaPredicted RBP5.02□□□□□ -1.61
USP47-211ENST00000531513 NSUN2Q08J23 767 aaKnown RBP eCLIP5.02□□□□□ -1.61
USP47-211ENST00000531513 TRPC3Q13507 836 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 CUL4BQ13620 913 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 TXNRD1Q16881 649 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 PLA1AQ53H76 456 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 FAXCQ5TGI0 409 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 KIAA1614Q5VZ46 1190 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 MRNIPQ6NTE8 343 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 CLNKQ7Z7G1 428 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 HEATR4Q86WZ0 1026 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 TMTC2Q8N394 836 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 SCAMP5Q8TAC9 235 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 MYCBPAPQ8TBZ2 947 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 SMCR8Q8TEV9 937 aaPredicted RBP5.02□□□□□ -1.61
USP47-211ENST00000531513 AFG1LQ8WV93 481 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 SNRNP27Q8WVK2 155 aaKnown RBP5.02□□□□□ -1.61
USP47-211ENST00000531513 THAP4Q8WY91 577 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 RSC1A1Q92681 617 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 MESP1Q9BRJ9 268 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 IMPG2Q9BZV3 1241 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 FAM83DQ9H4H8 585 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 JMJD4Q9H9V9 463 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 ZBTB26Q9HCK0 441 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 SEPSECSQ9HD40 501 aaKnown RBP5.02□□□□□ -1.61
USP47-211ENST00000531513 PRDM8Q9NQV8 689 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 BLOC1S4Q9NUP1 217 aa5.02□□□□□ -1.61
USP47-211ENST00000531513 HESX1Q9UBX0 185 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms