RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 VCPIP1Q96JH7 1222 aa15.14■□□□□ 0.01
CPSF1-206ENST00000531480 FAM83CQ9BQN1 747 aa15.14■□□□□ 0.01
CPSF1-206ENST00000531480 TRMT61BQ9BVS5 477 aaKnown RBP15.14■□□□□ 0.01
CPSF1-206ENST00000531480 POPDC2Q9HBU9 364 aa15.14■□□□□ 0.01
CPSF1-206ENST00000531480 ABHD10Q9NUJ1 306 aa15.14■□□□□ 0.01
CPSF1-206ENST00000531480 ARHGAP20Q9P2F6 1191 aa15.14■□□□□ 0.01
CPSF1-206ENST00000531480 NENFQ9UMX5 172 aa15.14■□□□□ 0.01
CPSF1-206ENST00000531480 TICRRQ7Z2Z1 1910 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 E2F8A0AVK6 867 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 PI4K2BG5E9Z4 385 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 DPYSL4O14531 572 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 HSF2BPO75031 334 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 IGLV3-25P01717 112 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 TPM1P09493 284 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 MBL2P11226 248 aaPredicted RBP15.13■□□□□ 0.01
CPSF1-206ENST00000531480 SKILP12757 684 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 TNFAIP3P21580 790 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 NSFP46459 744 aaKnown RBP15.13■□□□□ 0.01
CPSF1-206ENST00000531480 ZXDAP98168 799 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 MAPK8IP2Q13387 824 aaPredicted RBP15.13■□□□□ 0.01
CPSF1-206ENST00000531480 NNTQ13423 1086 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 TAF5Q15542 800 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 ASTE1Q2TB18 679 aaPredicted RBP15.13■□□□□ 0.01
CPSF1-206ENST00000531480 ARHGAP29Q52LW3 1261 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 C10orf120Q5SQS8 335 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 ACAD10Q6JQN1 1059 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 TOGARAM2Q6ZUX3 1019 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.13■□□□□ 0.01
CPSF1-206ENST00000531480 TC2NQ8N9U0 490 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 ST13P5Q8NFI4 369 aaPredicted RBP15.13■□□□□ 0.01
CPSF1-206ENST00000531480 DNASE1L2Q92874 299 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 NT5C3BQ969T7 300 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 SMOC2Q9H3U7 446 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 WDR35Q9P2L0 1181 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 TMEM59LQ9UK28 342 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 NUDT5Q9UKK9 219 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 STRIP2Q9ULQ0 834 aa15.13■□□□□ 0.01
CPSF1-206ENST00000531480 COL4A3Q01955 1670 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 TECTAO75443 2155 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 SSU72P8A0A1W2PR75 194 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 AKR1B15C9JRZ8 316 aaPredicted RBP15.12■□□□□ 0.01
CPSF1-206ENST00000531480 DCXO43602 365 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 NARSO43776 548 aaKnown RBP15.12■□□□□ 0.01
CPSF1-206ENST00000531480 IGLV3-27P01718 113 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 CALB1P05937 261 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 PLEKP08567 350 aaPredicted RBP15.12■□□□□ 0.01
CPSF1-206ENST00000531480 FECHP22830 423 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 MLLT6P55198 1093 aaPredicted RBP15.12■□□□□ 0.01
CPSF1-206ENST00000531480 ADKP55263 362 aaKnown RBP15.12■□□□□ 0.01
CPSF1-206ENST00000531480 GPC5P78333 572 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 COG7P83436 770 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 MTF1Q14872 753 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 SYPL2Q5VXT5 272 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 OR6B2Q6IFH4 312 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 Q6ZNB5 142 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 MMS22LQ6ZRQ5 1243 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 HTR3DQ70Z44 454 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 BNIPLQ7Z465 357 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 MCOLN2Q8IZK6 566 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 OSCP1Q8WVF1 389 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 EDEM1Q92611 657 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 GOLGA1Q92805 767 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 EDAQ92838 391 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 IRF7Q92985 503 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 ASIC4Q96FT7 647 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 ISCUQ9H1K1 167 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 SYNCQ9H7C4 482 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 GKN1Q9NS71 199 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 TAS2R14Q9NYV8 317 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 MARCH2Q9P0N8 246 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 WNT16Q9UBV4 365 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 NAALADL1Q9UQQ1 740 aa15.12■□□□□ 0.01
CPSF1-206ENST00000531480 HBS1LQ9Y450 684 aaKnown RBP15.12■□□□□ 0.01
CPSF1-206ENST00000531480 MDM4O15151 490 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 NRDCO43847 1150 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 DAB1O75553 588 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 STC2O76061 302 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 NCAM1P13591 858 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 ALADP13716 330 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 PFKPQ01813 784 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 RING1Q06587 406 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 EFEMP1Q12805 493 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 GRM2Q14416 872 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 TRIP4Q15650 581 aaPredicted RBP15.11■□□□□ 0.01
CPSF1-206ENST00000531480 C2CD6Q53TS8 623 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 PPP1R15BQ5SWA1 713 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 RSRC2Q7L4I2 434 aaKnown RBP15.11■□□□□ 0.01
CPSF1-206ENST00000531480 C3orf20Q8ND61 904 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 DQX1Q8TE96 717 aaKnown RBP15.11■□□□□ 0.01
CPSF1-206ENST00000531480 RNF139Q8WU17 664 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 WBP2Q969T9 261 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 FAM149B1Q96BN6 582 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 OTUB2Q96DC9 234 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 C11orf70Q9BRQ4 267 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 THG1LQ9NWX6 298 aaKnown RBP15.11■□□□□ 0.01
CPSF1-206ENST00000531480 SMPD4Q9NXE4 827 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 ADAM22Q9P0K1 906 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 ADAMTS1Q9UHI8 967 aa15.11■□□□□ 0.01
CPSF1-206ENST00000531480 A0A087X0T9 212 aa15.1■□□□□ 0.01
CPSF1-206ENST00000531480 ZNF263O14978 683 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms