RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 MYO16Q9Y6X6 1858 aa17.01■□□□□ 0.31
RELA-216ENST00000531238 SLC9A3R1O14745 358 aaPredicted RBP17.01■□□□□ 0.31
RELA-216ENST00000531238 MED7O43513 233 aa17.01■□□□□ 0.31
RELA-216ENST00000531238 HMBSP08397 361 aa17.01■□□□□ 0.31
RELA-216ENST00000531238 CDK11BP21127 795 aaKnown RBP17.01■□□□□ 0.31
RELA-216ENST00000531238 RAPGEF1Q13905 1077 aa17.01■□□□□ 0.31
RELA-216ENST00000531238 MEA1Q16626 185 aa17.01■□□□□ 0.31
RELA-216ENST00000531238 BTBD8Q5XKL5 378 aa17.01■□□□□ 0.31
RELA-216ENST00000531238 TSSK4Q6SA08 328 aa17.01■□□□□ 0.31
RELA-216ENST00000531238 TMEM110Q86TL2 294 aa17.01■□□□□ 0.31
RELA-216ENST00000531238 PASD1Q8IV76 773 aa17.01■□□□□ 0.31
RELA-216ENST00000531238 SIX6OS1Q8N1H7 587 aa17.01■□□□□ 0.31
RELA-216ENST00000531238 STK32AQ8WU08 396 aa17.01■□□□□ 0.31
RELA-216ENST00000531238 DDX1Q92499 740 aaKnown RBP17.01■□□□□ 0.31
RELA-216ENST00000531238 ATOH1Q92858 354 aaPredicted RBP17.01■□□□□ 0.31
RELA-216ENST00000531238 P2RY13Q9BPV8 354 aa17.01■□□□□ 0.31
RELA-216ENST00000531238 POLR3BQ9NW08 1133 aaPredicted RBP17.01■□□□□ 0.31
RELA-216ENST00000531238 TBC1D14Q9P2M4 693 aa17.01■□□□□ 0.31
RELA-216ENST00000531238 SFMBT1Q9UHJ3 866 aa17.01■□□□□ 0.31
RELA-216ENST00000531238 PCDHGC3Q9UN70 934 aa17.01■□□□□ 0.31
RELA-216ENST00000531238 WDR87Q6ZQQ6 2873 aa17■□□□□ 0.31
RELA-216ENST00000531238 MIA3Q5JRA6 1907 aa17■□□□□ 0.31
RELA-216ENST00000531238 MYOFQ9NZM1 2061 aa17■□□□□ 0.31
RELA-216ENST00000531238 SLC12A8A0AV02 714 aa17■□□□□ 0.31
RELA-216ENST00000531238 LGALS16A8MUM7 142 aa17■□□□□ 0.31
RELA-216ENST00000531238 TEX33O43247 280 aa17■□□□□ 0.31
RELA-216ENST00000531238 PAPSS1O43252 624 aaPredicted RBP17■□□□□ 0.31
RELA-216ENST00000531238 SP9P0CG40 484 aa17■□□□□ 0.31
RELA-216ENST00000531238 PLA2G5P39877 138 aa17■□□□□ 0.31
RELA-216ENST00000531238 MAGEA9P43362 315 aa17■□□□□ 0.31
RELA-216ENST00000531238 ZNF165P49910 485 aa17■□□□□ 0.31
RELA-216ENST00000531238 PTK2Q05397 1052 aa17■□□□□ 0.31
RELA-216ENST00000531238 NR1H3Q13133 447 aa17■□□□□ 0.31
RELA-216ENST00000531238 SYCP1Q15431 976 aa17■□□□□ 0.31
RELA-216ENST00000531238 DGKKQ5KSL6 1271 aa17■□□□□ 0.31
RELA-216ENST00000531238 SMYD5Q6GMV2 418 aa17■□□□□ 0.31
RELA-216ENST00000531238 MAMSTRQ6ZN01 415 aa17■□□□□ 0.31
RELA-216ENST00000531238 IRGQQ8WZA9 623 aa17■□□□□ 0.31
RELA-216ENST00000531238 CD101Q93033 1021 aa17■□□□□ 0.31
RELA-216ENST00000531238 NAT10Q9H0A0 1025 aaKnown RBP17■□□□□ 0.31
RELA-216ENST00000531238 LHX5Q9H2C1 402 aa17■□□□□ 0.31
RELA-216ENST00000531238 SPHK2Q9NRA0 654 aa17■□□□□ 0.31
RELA-216ENST00000531238 ST7Q9NRC1 585 aa17■□□□□ 0.31
RELA-216ENST00000531238 ABCC13Q9NSE7 274 aa17■□□□□ 0.31
RELA-216ENST00000531238 FAM207AQ9NSI2 230 aaPredicted RBP17■□□□□ 0.31
RELA-216ENST00000531238 MARCH2Q9P0N8 246 aa17■□□□□ 0.31
RELA-216ENST00000531238 FRYLO94915 3013 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 E5RJQ4 531 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 F8VZ95 297 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 K7EQS6 105 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 TRIM24O15164 1050 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 TDGF1P13385 188 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 CYP11B1P15538 503 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 JAM2P57087 298 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 POLR2FP61218 127 aaKnown RBP16.99■□□□□ 0.31
RELA-216ENST00000531238 COG7P83436 770 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 SATB1Q01826 763 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 UBXN1Q04323 297 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 GRSF1Q12849 480 aaKnown RBP eCLIP16.99■□□□□ 0.31
RELA-216ENST00000531238 PDCLQ13371 301 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 TAF5Q15542 800 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 FKBP15Q5T1M5 1219 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 TADA2BQ86TJ2 420 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 FMNL3Q8IVF7 1028 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 NAT16Q8N8M0 369 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 OTUB2Q96DC9 234 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 FAM122AQ96E09 287 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 PIWIL1Q96J94 861 aaKnown RBP16.99■□□□□ 0.31
RELA-216ENST00000531238 CPXM1Q96SM3 734 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 CDK5RAP1Q96SZ6 601 aaKnown RBP16.99■□□□□ 0.31
RELA-216ENST00000531238 CBX8Q9HC52 389 aa16.99■□□□□ 0.31
RELA-216ENST00000531238 AGO1Q9UL18 857 aaKnown RBP16.99■□□□□ 0.31
RELA-216ENST00000531238 FAM170AA1A519 330 aa16.98■□□□□ 0.31
RELA-216ENST00000531238 SMTNL1A8MU46 457 aa16.98■□□□□ 0.31
RELA-216ENST00000531238 LAMTOR5O43504 91 aa16.98■□□□□ 0.31
RELA-216ENST00000531238 FBXO21O94952 628 aa16.98■□□□□ 0.31
RELA-216ENST00000531238 LTFP02788 710 aa16.98■□□□□ 0.31
RELA-216ENST00000531238 CHRM1P11229 460 aaPredicted RBP16.98■□□□□ 0.31
RELA-216ENST00000531238 ADH5P11766 374 aa16.98■□□□□ 0.31
RELA-216ENST00000531238 DRD1P21728 446 aa16.98■□□□□ 0.31
RELA-216ENST00000531238 ACADSBP45954 432 aa16.98■□□□□ 0.31
RELA-216ENST00000531238 AMPD2Q01433 879 aa16.98■□□□□ 0.31
RELA-216ENST00000531238 CSTF1Q05048 431 aaKnown RBP16.98■□□□□ 0.31
RELA-216ENST00000531238 LRRC32Q14392 662 aa16.98■□□□□ 0.31
RELA-216ENST00000531238 TRIP4Q15650 581 aaPredicted RBP16.98■□□□□ 0.31
RELA-216ENST00000531238 ZSCAN23Q3MJ62 389 aa16.98■□□□□ 0.31
RELA-216ENST00000531238 SYPL2Q5VXT5 272 aa16.98■□□□□ 0.31
RELA-216ENST00000531238 RSRC2Q7L4I2 434 aaKnown RBP16.98■□□□□ 0.31
RELA-216ENST00000531238 NOP9Q86U38 636 aaKnown RBP16.98■□□□□ 0.31
RELA-216ENST00000531238 ETFBKMTQ8IXQ9 262 aa16.98■□□□□ 0.31
RELA-216ENST00000531238 PHTF2Q8N3S3 785 aa16.98■□□□□ 0.31
RELA-216ENST00000531238 NAP1L5Q96NT1 182 aaPredicted RBP16.98■□□□□ 0.31
RELA-216ENST00000531238 ERGIC2Q96RQ1 377 aa16.98■□□□□ 0.31
RELA-216ENST00000531238 NLRC4Q9NPP4 1024 aa16.98■□□□□ 0.31
RELA-216ENST00000531238 RTN4Q9NQC3 1192 aaKnown RBP16.98■□□□□ 0.31
RELA-216ENST00000531238 PRMT8Q9NR22 394 aaPredicted RBP16.98■□□□□ 0.31
RELA-216ENST00000531238 NAALADL1Q9UQQ1 740 aa16.98■□□□□ 0.31
RELA-216ENST00000531238 A0A0A0MRY4 1105 aa16.97■□□□□ 0.31
RELA-216ENST00000531238 MSI1O43347 362 aaKnown RBP16.97■□□□□ 0.31
RELA-216ENST00000531238 CORO1AP31146 461 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms