RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 CXorf21Q9HAI6 301 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 SAYSD1Q9NPB0 183 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 PSMC3IPQ9P2W1 217 aaPredicted RBP8.05□□□□□ -1.12
PTPRK-219ENST00000531050 SLC24A2Q9UI40 661 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 STRIP2Q9ULQ0 834 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 BCORQ6W2J9 1755 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 ASTN2O75129 1339 aaPredicted RBP8.05□□□□□ -1.12
PTPRK-219ENST00000531050 GOLGA8QA0A0J9YX86 632 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 C1orf232A0A0U1RR37 186 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 GOLGA8OA6NCC3 632 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 GOLGA8NF8WBI6 632 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 GOLGA8RI6L899 631 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 M0QX08 132 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 M0R2N6 131 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 FSCN2O14926 492 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 ATP2A1O14983 1001 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 TSPAN9O75954 239 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 SERPINA6P08185 405 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 CCDC159P0C7I6 412 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 IL2RBP14784 551 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 ZNF182P17025 639 aaPredicted RBP8.05□□□□□ -1.12
PTPRK-219ENST00000531050 GRK2P25098 689 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 RPL10P27635 214 aaKnown RBP8.05□□□□□ -1.12
PTPRK-219ENST00000531050 C19orf57Q0VDD7 668 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 GALNT1Q10472 559 aaPredicted RBP8.05□□□□□ -1.12
PTPRK-219ENST00000531050 PDIA2Q13087 525 aaKnown RBP8.05□□□□□ -1.12
PTPRK-219ENST00000531050 GRB10Q13322 594 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 FASTKD3Q14CZ7 662 aaKnown RBP8.05□□□□□ -1.12
PTPRK-219ENST00000531050 PFKFB3Q16875 520 aaPredicted RBP8.05□□□□□ -1.12
PTPRK-219ENST00000531050 LRIT3Q3SXY7 679 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 WDR78Q5VTH9 848 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 GPR107Q5VW38 600 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 IZUMO3Q5VZ72 239 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 TMC5Q6UXY8 1006 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 TRIM72Q6ZMU5 477 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 TMEM26Q6ZUK4 368 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 ELMOD2Q8IZ81 293 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 DEPDC4Q8N2C3 294 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 DTX3Q8N9I9 347 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 TERB1Q8NA31 727 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 MINDY2Q8NBR6 621 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 CDHR1Q96JP9 859 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 KLF6Q99612 283 aaPredicted RBP8.05□□□□□ -1.12
PTPRK-219ENST00000531050 AIFM2Q9BRQ8 373 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 WWP1Q9H0M0 922 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 RUBCNLQ9H714 662 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 NDFIP2Q9NV92 336 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 THG1LQ9NWX6 298 aaKnown RBP8.05□□□□□ -1.12
PTPRK-219ENST00000531050 GDAP2Q9NXN4 497 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 CNTN3Q9P232 1028 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 STK39Q9UEW8 545 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 HDAC9Q9UKV0 1011 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 PPME1Q9Y570 386 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 KIF13BQ9NQT8 1826 aa8.05□□□□□ -1.12
PTPRK-219ENST00000531050 ANKRD62A6NC57 917 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 GOLGA8IPA6NC78 632 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 FAM172BPA6NC97 362 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 LAD1O00515 517 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 PRKAB2O43741 272 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 ZNF26P17031 533 aaPredicted RBP8.04□□□□□ -1.12
PTPRK-219ENST00000531050 POLR2CP19387 275 aaPredicted RBP8.04□□□□□ -1.12
PTPRK-219ENST00000531050 ITGAXP20702 1163 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 EPHA3P29320 983 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 GRIA3P42263 894 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 B2MP61769 119 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 UBE2SQ16763 222 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 UBE2UQ5VVX9 321 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 SLX4IPQ5VYV7 408 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 CES4AQ5XG92 561 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 PRR23CQ6ZRP0 262 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 DENND5BQ6ZUT9 1274 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 SPARTQ8N0X7 666 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 LARGE2Q8N3Y3 721 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 NEDD1Q8NHV4 660 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 KBTBD7Q8WVZ9 684 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 PNMA5Q96PV4 448 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 NACC1Q96RE7 527 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 PKP2Q99959 881 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 TRIM56Q9BRZ2 755 aaKnown RBP8.04□□□□□ -1.12
PTPRK-219ENST00000531050 COPS7BQ9H9Q2 264 aaPredicted RBP8.04□□□□□ -1.12
PTPRK-219ENST00000531050 NANOGQ9H9S0 305 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 CYP4F11Q9HBI6 524 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 PNPLA3Q9NST1 481 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 LINC00854A0A1B0GVQ3 168 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 SDR42E2A6NKP2 422 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 PLOD2O00469 737 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 KLF11O14901 512 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 ENTPD3O75355 529 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 KRT6AP02538 564 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 KRT6BP04259 564 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 NMT1P30419 496 aaKnown RBP8.04□□□□□ -1.12
PTPRK-219ENST00000531050 IL6STP40189 918 aaPredicted RBP8.04□□□□□ -1.12
PTPRK-219ENST00000531050 ARL1P40616 181 aaPredicted RBP8.04□□□□□ -1.12
PTPRK-219ENST00000531050 AQP5P55064 265 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 EIF3EP60228 445 aaKnown RBP8.04□□□□□ -1.12
PTPRK-219ENST00000531050 IFITM3Q01628 133 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 OTUD4Q01804 1114 aaKnown RBP8.04□□□□□ -1.12
PTPRK-219ENST00000531050 TRAF2Q12933 501 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 NFATC3Q12968 1075 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 TFDP1Q14186 410 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms