RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 FAM71AQ8IYT1 594 aa19.62■□□□□ 0.73
GMDS-208ENST00000530927 PRRX2Q99811 253 aa19.62■□□□□ 0.73
GMDS-208ENST00000530927 CNGB3Q9NQW8 809 aa19.62■□□□□ 0.73
GMDS-208ENST00000530927 CACNA1IQ9P0X4 2223 aa19.62■□□□□ 0.73
GMDS-208ENST00000530927 LGALS16A8MUM7 142 aa19.61■□□□□ 0.73
GMDS-208ENST00000530927 E5RJQ4 531 aa19.61■□□□□ 0.73
GMDS-208ENST00000530927 TRDMT1O14717 391 aaKnown RBP19.61■□□□□ 0.73
GMDS-208ENST00000530927 NCAM2O15394 837 aa19.61■□□□□ 0.73
GMDS-208ENST00000530927 MSI1O43347 362 aaKnown RBP19.61■□□□□ 0.73
GMDS-208ENST00000530927 MED7O43513 233 aa19.61■□□□□ 0.73
GMDS-208ENST00000530927 SYCP1Q15431 976 aa19.61■□□□□ 0.73
GMDS-208ENST00000530927 TMEM25Q86YD3 366 aa19.61■□□□□ 0.73
GMDS-208ENST00000530927 ARHGAP18Q8N392 663 aa19.61■□□□□ 0.73
GMDS-208ENST00000530927 FAM122AQ96E09 287 aa19.61■□□□□ 0.73
GMDS-208ENST00000530927 PIWIL1Q96J94 861 aaKnown RBP19.61■□□□□ 0.73
GMDS-208ENST00000530927 P2RY13Q9BPV8 354 aa19.61■□□□□ 0.73
GMDS-208ENST00000530927 MARCH2Q9P0N8 246 aa19.61■□□□□ 0.73
GMDS-208ENST00000530927 SLC12A8A0AV02 714 aa19.6■□□□□ 0.73
GMDS-208ENST00000530927 F8VZ95 297 aa19.6■□□□□ 0.73
GMDS-208ENST00000530927 RPL34P49207 117 aaKnown RBP19.6■□□□□ 0.73
GMDS-208ENST00000530927 ZNF165P49910 485 aa19.6■□□□□ 0.73
GMDS-208ENST00000530927 POLR2FP61218 127 aaKnown RBP19.6■□□□□ 0.73
GMDS-208ENST00000530927 SATB1Q01826 763 aa19.6■□□□□ 0.73
GMDS-208ENST00000530927 FKBP15Q5T1M5 1219 aa19.6■□□□□ 0.73
GMDS-208ENST00000530927 TAF3Q5VWG9 929 aa19.6■□□□□ 0.73
GMDS-208ENST00000530927 HTR3DQ70Z44 454 aa19.6■□□□□ 0.73
GMDS-208ENST00000530927 NAT16Q8N8M0 369 aa19.6■□□□□ 0.73
GMDS-208ENST00000530927 C1orf131Q8NDD1 294 aaKnown RBP19.6■□□□□ 0.73
GMDS-208ENST00000530927 CD101Q93033 1021 aa19.6■□□□□ 0.73
GMDS-208ENST00000530927 HSFY1Q96LI6 401 aa19.6■□□□□ 0.73
GMDS-208ENST00000530927 BPIFA3Q9BQP9 254 aa19.6■□□□□ 0.73
GMDS-208ENST00000530927 SLC4A5Q9BY07 1137 aa19.6■□□□□ 0.73
GMDS-208ENST00000530927 NLRC4Q9NPP4 1024 aa19.6■□□□□ 0.73
GMDS-208ENST00000530927 SLC9A3R1O14745 358 aaPredicted RBP19.59■□□□□ 0.73
GMDS-208ENST00000530927 TRIM24O15164 1050 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 TEX33O43247 280 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 PAPSS1O43252 624 aaPredicted RBP19.59■□□□□ 0.73
GMDS-208ENST00000530927 FYNP06241 537 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 TPM2P07951 284 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 SP9P0CG40 484 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 ADH5P11766 374 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 UBXN1Q04323 297 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 PTK2Q05397 1052 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 GRSF1Q12849 480 aaKnown RBP eCLIP19.59■□□□□ 0.733e-7■■■■□ 24.8
GMDS-208ENST00000530927 PDCLQ13371 301 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 IQCB1Q15051 598 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 Q6ZNB5 142 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 TPGS1Q6ZTW0 290 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 FMNL3Q8IVF7 1028 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 ZNF276Q8N554 614 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 BHMTQ93088 406 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 CPXM1Q96SM3 734 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 NAT10Q9H0A0 1025 aaKnown RBP19.59■□□□□ 0.73
GMDS-208ENST00000530927 TBC1D14Q9P2M4 693 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 ATG2BQ96BY7 2078 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 LAMTOR5O43504 91 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 CYP11B1P15538 503 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 CORO1AP31146 461 aaKnown RBP19.59■□□□□ 0.73
GMDS-208ENST00000530927 CSTF1Q05048 431 aaKnown RBP19.59■□□□□ 0.73
GMDS-208ENST00000530927 KDSRQ06136 332 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 NR1H3Q13133 447 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 LRRC32Q14392 662 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 TAF5Q15542 800 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 ANO4Q32M45 955 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 C1orf228Q6PIY5 440 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 TADA2BQ86TJ2 420 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 NOP9Q86U38 636 aaKnown RBP19.59■□□□□ 0.73
GMDS-208ENST00000530927 SCML4Q8N228 414 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 SPHK2Q9NRA0 654 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 PCDHGC3Q9UN70 934 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 R4GN57 208 aa19.59■□□□□ 0.73
GMDS-208ENST00000530927 LRRC10BA6NIK2 292 aa19.58■□□□□ 0.72
GMDS-208ENST00000530927 RNF40O75150 1001 aa19.58■□□□□ 0.72
GMDS-208ENST00000530927 GFPT2O94808 682 aa19.58■□□□□ 0.72
GMDS-208ENST00000530927 LTFP02788 710 aa19.58■□□□□ 0.72
GMDS-208ENST00000530927 MAGEA9P43362 315 aa19.58■□□□□ 0.72
GMDS-208ENST00000530927 SEC13P55735 322 aa19.58■□□□□ 0.72
GMDS-208ENST00000530927 GOLGA8FQ08AF8 430 aa19.58■□□□□ 0.72
GMDS-208ENST00000530927 GOLGA8DPQ0D2H9 430 aa19.58■□□□□ 0.72
GMDS-208ENST00000530927 LUZP1Q86V48 1076 aa19.58■□□□□ 0.72
GMDS-208ENST00000530927 DENND1CQ8IV53 801 aa19.58■□□□□ 0.72
GMDS-208ENST00000530927 KIAA1958Q8N8K9 716 aa19.58■□□□□ 0.72
GMDS-208ENST00000530927 ANKRD20A12PQ8NF67 263 aa19.58■□□□□ 0.72
GMDS-208ENST00000530927 ADAM32Q8TC27 787 aa19.58■□□□□ 0.72
GMDS-208ENST00000530927 SLC20A1Q8WUM9 679 aa19.58■□□□□ 0.72
GMDS-208ENST00000530927 DDX1Q92499 740 aaKnown RBP19.58■□□□□ 0.72
GMDS-208ENST00000530927 PCMTD1Q96MG8 357 aaPredicted RBP19.58■□□□□ 0.72
GMDS-208ENST00000530927 CDK5RAP1Q96SZ6 601 aaKnown RBP19.58■□□□□ 0.72
GMDS-208ENST00000530927 STK33Q9BYT3 514 aa19.58■□□□□ 0.72
GMDS-208ENST00000530927 CBX8Q9HC52 389 aa19.58■□□□□ 0.72
GMDS-208ENST00000530927 PRMT8Q9NR22 394 aaPredicted RBP19.58■□□□□ 0.72
GMDS-208ENST00000530927 ABCC13Q9NSE7 274 aa19.58■□□□□ 0.72
GMDS-208ENST00000530927 LSM7Q9UK45 103 aaKnown RBP19.58■□□□□ 0.72
GMDS-208ENST00000530927 NAALADL1Q9UQQ1 740 aa19.58■□□□□ 0.72
GMDS-208ENST00000530927 CACNA1HO95180 2353 aa19.57■□□□□ 0.72
GMDS-208ENST00000530927 KIAA1549LQ6ZVL6 1849 aa19.57■□□□□ 0.72
GMDS-208ENST00000530927 ADH1CP00326 375 aa19.57■□□□□ 0.72
GMDS-208ENST00000530927 ERBB2P04626 1255 aa19.57■□□□□ 0.72
GMDS-208ENST00000530927 KRT9P35527 623 aa19.57■□□□□ 0.72
GMDS-208ENST00000530927 JAM2P57087 298 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms