RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 WLSQ5T9L3 541 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 TTC39BQ5VTQ0 682 aaPredicted RBP17.86■□□□□ 0.45
BRCA2-204ENST00000530893 BZW1Q7L1Q6 419 aaKnown RBP17.86■□□□□ 0.45
BRCA2-204ENST00000530893 LRRC6Q86X45 466 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 VPS52Q8N1B4 723 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 ANKLE1Q8NAG6 615 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 BRI3BPQ8WY22 251 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 C18orf25Q96B23 403 aaPredicted RBP17.86■□□□□ 0.45
BRCA2-204ENST00000530893 RAB3IPQ96QF0 476 aaPredicted RBP17.86■□□□□ 0.45
BRCA2-204ENST00000530893 B3GNT5Q9BYG0 378 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 CXCL16Q9H2A7 254 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 RCOR3Q9P2K3 495 aaPredicted RBP17.86■□□□□ 0.45
BRCA2-204ENST00000530893 ZC3H7BQ9UGR2 993 aaKnown RBP17.86■□□□□ 0.45
BRCA2-204ENST00000530893 IQCA1LA6NCM1 817 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 KPNA7A9QM74 516 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 KRT37O76014 449 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 SMIM10L2AP0DMW4 78 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 SMIM10L2BP0DMW5 78 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 KCNE1P15382 129 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 GNL1P36915 607 aaPredicted RBP17.86■□□□□ 0.45
BRCA2-204ENST00000530893 XKR4Q5GH76 650 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 SH2D5Q6ZV89 423 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 LIMS2Q7Z4I7 341 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 CAND1Q86VP6 1230 aaKnown RBP17.86■□□□□ 0.45
BRCA2-204ENST00000530893 PSTKQ8IV42 348 aaKnown RBP17.86■□□□□ 0.45
BRCA2-204ENST00000530893 C7orf31Q8N865 590 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 KBTBD7Q8WVZ9 684 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 ERP27Q96DN0 273 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 PARK7Q99497 189 aaKnown RBP17.86■□□□□ 0.45
BRCA2-204ENST00000530893 OSMRQ99650 979 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 ADAM33Q9BZ11 813 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 MYLK2Q9H1R3 596 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 NXF3Q9H4D5 531 aaKnown RBP17.86■□□□□ 0.45
BRCA2-204ENST00000530893 MANSC1Q9H8J5 431 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 POPDC2Q9HBU9 364 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 BAIAP2L1Q9UHR4 511 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 AP4E1Q9UPM8 1137 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 CHKBQ9Y259 395 aa17.86■□□□□ 0.45
BRCA2-204ENST00000530893 IL1BP01584 269 aa17.85■□□□□ 0.45
BRCA2-204ENST00000530893 C1QAP02745 245 aa17.85■□□□□ 0.45
BRCA2-204ENST00000530893 APRTP07741 180 aa17.85■□□□□ 0.45
BRCA2-204ENST00000530893 CYP2C9P11712 490 aa17.85■□□□□ 0.45
BRCA2-204ENST00000530893 MAGEA3P43357 314 aa17.85■□□□□ 0.45
BRCA2-204ENST00000530893 RASSF2P50749 326 aa17.85■□□□□ 0.45
BRCA2-204ENST00000530893 NEK3P51956 506 aa17.85■□□□□ 0.45
BRCA2-204ENST00000530893 TMEM62Q0P6H9 643 aa17.85■□□□□ 0.45
BRCA2-204ENST00000530893 MTM1Q13496 603 aa17.85■□□□□ 0.45
BRCA2-204ENST00000530893 PREPLQ4J6C6 727 aaPredicted RBP17.85■□□□□ 0.45
BRCA2-204ENST00000530893 EFHC1Q5JVL4 640 aa17.85■□□□□ 0.45
BRCA2-204ENST00000530893 INPP5DQ92835 1189 aa17.85■□□□□ 0.45
BRCA2-204ENST00000530893 TNIP3Q96KP6 325 aa17.85■□□□□ 0.45
BRCA2-204ENST00000530893 SNX25Q9H3E2 840 aa17.85■□□□□ 0.45
BRCA2-204ENST00000530893 DPEP3Q9H4B8 488 aa17.85■□□□□ 0.45
BRCA2-204ENST00000530893 ETNK1Q9HBU6 452 aa17.85■□□□□ 0.45
BRCA2-204ENST00000530893 TTLL3Q9Y4R7 772 aa17.85■□□□□ 0.45
BRCA2-204ENST00000530893 SMIM28A0A1B0GU29 152 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 SLC15A5A6NIM6 579 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 HACD1B0YJ81 288 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 AVILO75366 819 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 TGDSO95455 350 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 FGFR1P11362 822 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 EZRP15311 586 aaKnown RBP17.84■□□□□ 0.45
BRCA2-204ENST00000530893 ETV4P43268 484 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 TAF6P49848 677 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 FAAP100Q0VG06 881 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 PARP6Q2NL67 630 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 SV2CQ496J9 727 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 GLRA4Q5JXX5 417 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 HACE1Q8IYU2 909 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 APPL2Q8NEU8 664 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 MTBPQ96DY7 904 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 QKIQ96PU8 341 aaKnown RBP eCLIP17.84■□□□□ 0.45
BRCA2-204ENST00000530893 LRMDAQ9H2I8 198 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 DHX35Q9H5Z1 703 aaKnown RBP17.84■□□□□ 0.45
BRCA2-204ENST00000530893 XAB2Q9HCS7 855 aaKnown RBP17.84■□□□□ 0.45
BRCA2-204ENST00000530893 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.84■□□□□ 0.45
BRCA2-204ENST00000530893 HES2Q9Y543 173 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 HNRNPCL1O60812 293 aaKnown RBP17.84■□□□□ 0.45
BRCA2-204ENST00000530893 SNRPAP09012 282 aaKnown RBP17.84■□□□□ 0.45
BRCA2-204ENST00000530893 CCDC91Q7Z6B0 441 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 AGGF1Q8N302 714 aaeCLIP17.84■□□□□ 0.45
BRCA2-204ENST00000530893 CSPG4P5Q96PW8 444 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 TMEM237Q96Q45 408 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 CDHR5Q9HBB8 845 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 MTMR10Q9NXD2 777 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 SLC17A7Q9P2U7 560 aa17.84■□□□□ 0.45
BRCA2-204ENST00000530893 GLTPD2A6NH11 291 aa17.83■□□□□ 0.45
BRCA2-204ENST00000530893 GOLGA8RI6L899 631 aa17.83■□□□□ 0.45
BRCA2-204ENST00000530893 KLF11O14901 512 aa17.83■□□□□ 0.45
BRCA2-204ENST00000530893 XPO1O14980 1071 aaKnown RBP17.83■□□□□ 0.45
BRCA2-204ENST00000530893 PIAS1O75925 651 aa17.83■□□□□ 0.45
BRCA2-204ENST00000530893 APOEP02649 317 aa17.83■□□□□ 0.45
BRCA2-204ENST00000530893 KRT16P08779 473 aa17.83■□□□□ 0.45
BRCA2-204ENST00000530893 FAM163BP0C2L3 166 aa17.83■□□□□ 0.45
BRCA2-204ENST00000530893 CCDC130P13994 396 aa17.83■□□□□ 0.45
BRCA2-204ENST00000530893 YBX3P16989 372 aaKnown RBP eCLIP17.83■□□□□ 0.45
BRCA2-204ENST00000530893 ADORA2BP29275 332 aa17.83■□□□□ 0.45
BRCA2-204ENST00000530893 FKBP1BP68106 108 aa17.83■□□□□ 0.45
BRCA2-204ENST00000530893 SARNPP82979 210 aaKnown RBP17.83■□□□□ 0.45
BRCA2-204ENST00000530893 CDK16Q00536 496 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms