RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 CCDC66A2RUB6 948 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 MIF4GDA9UHW6 222 aaKnown RBP8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 KCNK3O14649 394 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 TLR5O60602 858 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 LRCH4O75427 683 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 URI1O94763 535 aaPredicted RBP8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 FGF19O95750 216 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 TBX18O95935 607 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 F9P00740 461 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 F11P03951 625 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 ZDHHC11BP0C7U3 371 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 TFE3P19532 575 aaPredicted RBP8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 GABRR2P28476 465 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 MIPP30301 263 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 RDXP35241 583 aaKnown RBP8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 PCK1P35558 622 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 ATP5C1P36542 298 aaKnown RBP8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 TAS2R40P59535 323 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 PITX1P78337 314 aaPredicted RBP8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 HYAL1Q12794 435 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 RAB6CQ53S08 254 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 EP400NLQ6ZTU2 488 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 PDZD4Q76G19 769 aaPredicted RBP8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 STRADAQ7RTN6 431 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 TAC4Q86UU9 113 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 ARFGAP1Q8N6T3 406 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 VN1R2Q8NFZ6 395 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 DQX1Q8TE96 717 aaKnown RBP8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 UBE2Q2Q8WVN8 375 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 MRPS31Q92665 395 aaKnown RBP8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 CENPIQ92674 756 aaPredicted RBP8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 CDK5RAP1Q96SZ6 601 aaKnown RBP8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 PSMB7Q99436 277 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 TLR10Q9BXR5 811 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 PRKD2Q9BZL6 878 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 RAB6CQ9H0N0 254 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 CCSER2Q9H7U1 834 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 TRPC7Q9HCX4 862 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 OLA1Q9NTK5 396 aaKnown RBP8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 HCFC1R1Q9NWW0 138 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 ZDHHC7Q9NXF8 308 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 LMCD1Q9NZU5 365 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 SFMBT1Q9UHJ3 866 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 RASAL2Q9UJF2 1139 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 PCDHA3Q9Y5H8 950 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 KIAA1671Q9BY89 1806 aa8.87□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 VWA8A3KMH1 1905 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 A0A1W2PRU2 124 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 SLC12A8A0AV02 714 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 SOX1O00570 391 aaPredicted RBP8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 MDM4O15151 490 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 DDX3YO15523 660 aaKnown RBP8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 LINC01565O15544 149 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 PSTPIP1O43586 416 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 ENDOD1O94919 500 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 HMBSP08397 361 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 KRT7P08729 469 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 TCF4P15884 667 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 GJA1P17302 382 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 CTNNA2P26232 953 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 CDC25CP30307 473 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 HOXA9P31269 272 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 CTNNA1P35221 906 aaKnown RBP8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 ATXN1P54253 815 aaKnown RBP8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 HDAC4P56524 1084 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 RWDD2BP57060 319 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 TBX4P57082 545 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 ARL13BQ3SXY8 428 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 ATP13A4Q4VNC1 1196 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 ARHGAP15Q53QZ3 475 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 BOLA3Q53S33 107 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 KCNT1Q5JUK3 1230 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 RARS2Q5T160 578 aaKnown RBP8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 LRRC38Q5VT99 294 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 SNX30Q5VWJ9 437 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 TXNDC8Q6A555 127 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 TMC5Q6UXY8 1006 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 GRASPQ7Z6J2 395 aaPredicted RBP8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 FAM131BQ86XD5 332 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 MIB1Q86YT6 1006 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 TMC8Q8IU68 726 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 MICALL1Q8N3F8 863 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 EFHBQ8N7U6 833 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 KCTD6Q8NC69 237 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 SMG7Q92540 1137 aaKnown RBP8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 HSPH1Q92598 858 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 KRT35Q92764 455 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 CD101Q93033 1021 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 NT5C3BQ969T7 300 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 HES6Q96HZ4 224 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 LRCH3Q96II8 777 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 SERPINB11Q96P15 392 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 APOL5Q9BWW9 433 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 LRRC3Q9BY71 257 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 SMOC2Q9H3U7 446 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 WDCPQ9H6R7 721 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 SFXN1Q9H9B4 322 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 IL21Q9HBE4 155 aa8.86□□□□□ -0.99
NEDD8-MDP1-201ENST00000530579 PIGVQ9NUD9 493 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms