RNA–Protein interactions for RNA: ENST00000530120.5

CSRP1-213, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 4

Gene CSRP1, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-213ENST00000530120 TMEM30AQ9NV96 361 aa12.67□□□□□ -0.38
CSRP1-213ENST00000530120 SMPD4Q9NXE4 827 aa12.67□□□□□ -0.38
CSRP1-213ENST00000530120 TRAF3IP3Q9Y228 551 aa12.67□□□□□ -0.38
CSRP1-213ENST00000530120 SH3BP1Q9Y3L3 701 aa12.67□□□□□ -0.38
CSRP1-213ENST00000530120 ATP6V1DQ9Y5K8 247 aa12.67□□□□□ -0.38
CSRP1-213ENST00000530120 CELSR3Q9NYQ7 3312 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 URB1O60287 2271 aaKnown RBP12.66□□□□□ -0.38
CSRP1-213ENST00000530120 CLDN5O00501 218 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 COCHO43405 550 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 AP1G2O75843 785 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 KAT7O95251 611 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 ASS1P00966 412 aaKnown RBP12.66□□□□□ -0.38
CSRP1-213ENST00000530120 SERPINF2P08697 491 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 FTH1P19P0C7X4 201 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 PFKFB1P16118 471 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 TIE1P35590 1138 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 CASP4P49662 377 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 KRT85P78386 507 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 RPL6Q02878 288 aaKnown RBP12.66□□□□□ -0.38
CSRP1-213ENST00000530120 DNM1Q05193 864 aaKnown RBP12.66□□□□□ -0.38
CSRP1-213ENST00000530120 INCA1Q0VD86 236 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 IFRD2Q12894 506 aaPredicted RBP12.66□□□□□ -0.38
CSRP1-213ENST00000530120 KMT5BQ4FZB7 885 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 FOXD4L5Q5VV16 416 aaPredicted RBP12.66□□□□□ -0.38
CSRP1-213ENST00000530120 TMEM92Q6UXU6 159 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 SLC36A4Q6YBV0 504 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 SCARA5Q6ZMJ2 495 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 INTS8Q75QN2 995 aaKnown RBP12.66□□□□□ -0.38
CSRP1-213ENST00000530120 FUKQ8N0W3 1084 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 CRYBG2Q8N1P7 616 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 TTC39CQ8N584 583 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 PLEKHO2Q8TD55 490 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 FOXD4L4Q8WXT5 416 aaPredicted RBP12.66□□□□□ -0.38
CSRP1-213ENST00000530120 CCDC34Q96HJ3 373 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 ZFRQ96KR1 1074 aaKnown RBP12.66□□□□□ -0.38
CSRP1-213ENST00000530120 PPP1R9BQ96SB3 815 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 NACA2Q9H009 215 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 ARHGEF4Q9NR80 690 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 TLR8Q9NR97 1041 aaKnown RBP12.66□□□□□ -0.38
CSRP1-213ENST00000530120 SERTAD1Q9UHV2 236 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 PCDHA5Q9Y5H7 936 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 PCDH15Q96QU1 1955 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 PLXNB3Q9ULL4 1909 aa12.66□□□□□ -0.38
CSRP1-213ENST00000530120 ASXL3Q9C0F0 2248 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 MYOFQ9NZM1 2061 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 FAM237AA0A1B0GTK4 181 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 TCRBV21S2A2A0A5A6 115 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 RHOBTB3O94955 611 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 VNN1O95497 513 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 CAPNS1P04632 268 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 FAM200BP0CF97 657 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 RPL13P26373 211 aaKnown RBP12.65□□□□□ -0.38
CSRP1-213ENST00000530120 PIK3CAP42336 1068 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 ASPAP45381 313 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 PSEN1P49768 467 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 CDH8P55286 799 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 MAP7D1Q3KQU3 841 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 FOXD4L6Q3SYB3 417 aaPredicted RBP12.65□□□□□ -0.38
CSRP1-213ENST00000530120 PEAR1Q5VY43 1037 aaPredicted RBP12.65□□□□□ -0.38
CSRP1-213ENST00000530120 KLHDC10Q6PID8 442 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 RHBDF2Q6PJF5 856 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 FOXD4L3Q6VB84 417 aaPredicted RBP12.65□□□□□ -0.38
CSRP1-213ENST00000530120 PAQR9Q6ZVX9 377 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 SV2AQ7L0J3 742 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 TADA2BQ86TJ2 420 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 ETFBKMTQ8IXQ9 262 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 GRAMD1CQ8IYS0 662 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 FRMD1Q8N878 549 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 IL17RCQ8NAC3 791 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 CCDC150Q8NCX0 1101 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 MDM1Q8TC05 714 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 ADAMTS14Q8WXS8 1223 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 TRIM44Q96DX7 344 aaPredicted RBP12.65□□□□□ -0.38
CSRP1-213ENST00000530120 SPATA32Q96LK8 384 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 CDK5RAP1Q96SZ6 601 aaKnown RBP12.65□□□□□ -0.38
CSRP1-213ENST00000530120 KCNK16Q96T55 309 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 CYP3A43Q9HB55 503 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 CYLDQ9NQC7 956 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 APOBEC2Q9Y235 224 aaKnown RBP12.65□□□□□ -0.38
CSRP1-213ENST00000530120 HPSEQ9Y251 543 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 RAXQ9Y2V3 346 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 PTPRBP23467 1997 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 SHROOM3Q8TF72 1996 aa12.65□□□□□ -0.38
CSRP1-213ENST00000530120 SGK1O00141 431 aa12.64□□□□□ -0.39
CSRP1-213ENST00000530120 ARHGAP33O14559 1287 aa12.64□□□□□ -0.39
CSRP1-213ENST00000530120 ZBTB24O43167 697 aaPredicted RBP12.64□□□□□ -0.39
CSRP1-213ENST00000530120 SH3BP5O60239 455 aa12.64□□□□□ -0.39
CSRP1-213ENST00000530120 TLR5O60602 858 aa12.64□□□□□ -0.39
CSRP1-213ENST00000530120 CHRM1P11229 460 aaPredicted RBP12.64□□□□□ -0.39
CSRP1-213ENST00000530120 KRT13P13646 458 aa12.64□□□□□ -0.39
CSRP1-213ENST00000530120 CD59P13987 128 aa12.64□□□□□ -0.39
CSRP1-213ENST00000530120 HNRNPLP14866 589 aaKnown RBP eCLIP12.64□□□□□ -0.39
CSRP1-213ENST00000530120 KIR2DL1P43626 348 aaPredicted RBP12.64□□□□□ -0.39
CSRP1-213ENST00000530120 NDST1P52848 882 aa12.64□□□□□ -0.39
CSRP1-213ENST00000530120 SLC14A1Q13336 389 aa12.64□□□□□ -0.39
CSRP1-213ENST00000530120 LY6G5CQ5SRR4 150 aa12.64□□□□□ -0.39
CSRP1-213ENST00000530120 CEP135Q66GS9 1140 aa12.64□□□□□ -0.39
CSRP1-213ENST00000530120 CCNI2Q6ZMN8 369 aaPredicted RBP12.64□□□□□ -0.39
CSRP1-213ENST00000530120 ACOT1Q86TX2 421 aa12.64□□□□□ -0.39
CSRP1-213ENST00000530120 DEFB119Q8N690 84 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms