RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 TGM2P21980 687 aa16.07■□□□□ 0.16
CCDC90B-213ENST00000529611 CYP2F1P24903 491 aa16.07■□□□□ 0.16
CCDC90B-213ENST00000529611 EIF3BP55884 814 aaKnown RBP16.07■□□□□ 0.16
CCDC90B-213ENST00000529611 C1orf228Q6PIY5 440 aa16.07■□□□□ 0.16
CCDC90B-213ENST00000529611 TRMT10CQ7L0Y3 403 aaKnown RBP16.07■□□□□ 0.16
CCDC90B-213ENST00000529611 SH2D3CQ8N5H7 860 aa16.07■□□□□ 0.16
CCDC90B-213ENST00000529611 RSAD2Q8WXG1 361 aa16.07■□□□□ 0.16
CCDC90B-213ENST00000529611 ATP6V1G3Q96LB4 118 aa16.07■□□□□ 0.16
CCDC90B-213ENST00000529611 BEGAINQ9BUH8 593 aa16.07■□□□□ 0.16
CCDC90B-213ENST00000529611 DNAJC17Q9NVM6 304 aaKnown RBP16.07■□□□□ 0.16
CCDC90B-213ENST00000529611 FZD10Q9ULW2 581 aa16.07■□□□□ 0.16
CCDC90B-213ENST00000529611 PCDHB7Q9Y5E2 793 aa16.07■□□□□ 0.16
CCDC90B-213ENST00000529611 TTC3P53804 2025 aa16.07■□□□□ 0.16
CCDC90B-213ENST00000529611 GOLGA6L10A6NI86 522 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 LTFP02788 710 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 RDXP35241 583 aaKnown RBP16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 GATMP50440 423 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 ATN1P54259 1190 aaPredicted RBP16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 BCAR1P56945 870 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 ROR1Q01973 937 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 ABI1Q8IZP0 508 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 SCLYQ96I15 445 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 CASD1Q96PB1 797 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 NRDE2Q9H7Z3 1164 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 PNPLA8Q9NP80 782 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 TPX2Q9ULW0 747 aaKnown RBP16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 SCN5AQ14524 2016 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 SYNJ2BP-COX16A0A087WUM0 186 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 CAPN9O14815 690 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 OAZ2O95190 189 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 IFFO1Q0D2I5 559 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 RNASEH2BQ5TBB1 312 aaKnown RBP16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 PM20D1Q6GTS8 502 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 ZC3H18Q86VM9 953 aaKnown RBP16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 PSTKQ8IV42 348 aaKnown RBP16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 CRIPAKQ8N1N5 446 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 PYROXD2Q8N2H3 581 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 ZCCHC9Q8N567 271 aaKnown RBP16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 FAM71DQ8N9W8 422 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 APBB2Q92870 758 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 CSPG4P5Q96PW8 444 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 PIGVQ9NUD9 493 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 COX16Q9P0S2 106 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 USP3Q9Y6I4 520 aa16.06■□□□□ 0.16
CCDC90B-213ENST00000529611 TANC1Q9C0D5 1861 aa16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 HMGB1P1B2RPK0 211 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 OR4Q2P0C623 313 aa16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 RPL22P35268 128 aaKnown RBP16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 MNX1P50219 401 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 DEUP1Q05D60 604 aa16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 NME3Q13232 169 aa16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 MORF4L2Q15014 288 aa16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 KRT71Q3SY84 523 aa16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 DARS2Q6PI48 645 aaKnown RBP16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 B4GALNT4Q76KP1 1039 aa16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 ANKRD33Q7Z3H0 272 aa16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 SPATA2LQ8IUW3 424 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 SCML4Q8N228 414 aa16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 SLC7A14Q8TBB6 771 aa16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 IRGQQ8WZA9 623 aa16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 FOXP3Q9BZS1 431 aa16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 HIPK3Q9H422 1215 aa16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 TMPRSS4Q9NRS4 437 aa16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 PSD3Q9NYI0 1048 aa16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 CWC15Q9P013 229 aaKnown RBP16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 HEY1Q9Y5J3 304 aa16.05■□□□□ 0.16
CCDC90B-213ENST00000529611 COL4A4P53420 1690 aaPredicted RBP16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 PATJQ8NI35 1801 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 TRAPPC3O43617 180 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 TADA2AO75478 443 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 NCAM1P13591 858 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 GOT1P17174 413 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 STIP1P31948 543 aaKnown RBP16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 NRLP54845 237 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 C4orf50Q6ZRC1 276 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 RELL1Q8IUW5 271 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 ADAM32Q8TC27 787 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 ZCWPW1Q9H0M4 648 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 CENPHQ9H3R5 247 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 WDR6Q9NNW5 1121 aaKnown RBP16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 SHOC2Q9UQ13 582 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 FARP1Q9Y4F1 1045 aaPredicted RBP16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 VWA8A3KMH1 1905 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 H7C0C1 242 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 MAP3K6O95382 1288 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 CXCL10P02778 98 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 ATP5OP48047 213 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 CTCFP49711 727 aaPredicted RBP16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 CCL23P55773 120 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 SLC39A12Q504Y0 691 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 SLC39A5Q6ZMH5 540 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 FAM43BQ6ZT52 329 aaPredicted RBP16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 UHMK1Q8TAS1 419 aaKnown RBP16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 PGAP3Q96FM1 320 aaPredicted RBP16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 RBM15Q96T37 977 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 SLC9A7Q96T83 725 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 USP29Q9HBJ7 922 aa16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 RCOR3Q9P2K3 495 aaPredicted RBP16.04■□□□□ 0.16
CCDC90B-213ENST00000529611 HCSTQ9UBK5 93 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms