RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 SHC4Q6S5L8 630 aa10.49□□□□□ -0.73
CAPN1-210ENST00000527699 PAQR9Q6ZVX9 377 aa10.49□□□□□ -0.73
CAPN1-210ENST00000527699 EPM2AIP1Q7L775 607 aaPredicted RBP10.49□□□□□ -0.73
CAPN1-210ENST00000527699 GPR155Q7Z3F1 870 aa10.49□□□□□ -0.73
CAPN1-210ENST00000527699 PRICKLE2Q7Z3G6 844 aa10.49□□□□□ -0.73
CAPN1-210ENST00000527699 ZNF513Q8N8E2 541 aaPredicted RBP10.49□□□□□ -0.73
CAPN1-210ENST00000527699 LINC00301Q8NCQ3 95 aa10.49□□□□□ -0.73
CAPN1-210ENST00000527699 OLIG1Q8TAK6 271 aa10.49□□□□□ -0.73
CAPN1-210ENST00000527699 SCFD1Q8WVM8 642 aa10.49□□□□□ -0.73
CAPN1-210ENST00000527699 ZFRQ96KR1 1074 aaKnown RBP10.49□□□□□ -0.73
CAPN1-210ENST00000527699 CAMK1GQ96NX5 476 aa10.49□□□□□ -0.73
CAPN1-210ENST00000527699 ELOVL4Q9GZR5 314 aa10.49□□□□□ -0.73
CAPN1-210ENST00000527699 KIAA1586Q9HCI6 787 aa10.49□□□□□ -0.73
CAPN1-210ENST00000527699 KRT82Q9NSB4 513 aa10.49□□□□□ -0.73
CAPN1-210ENST00000527699 DNAJC17Q9NVM6 304 aaKnown RBP10.49□□□□□ -0.73
CAPN1-210ENST00000527699 PLK2Q9NYY3 685 aa10.49□□□□□ -0.73
CAPN1-210ENST00000527699 DNMT3LQ9UJW3 386 aa10.49□□□□□ -0.73
CAPN1-210ENST00000527699 HCN2Q9UL51 889 aa10.49□□□□□ -0.73
CAPN1-210ENST00000527699 CYP8B1Q9UNU6 501 aa10.49□□□□□ -0.73
CAPN1-210ENST00000527699 APOBEC2Q9Y235 224 aaKnown RBP10.49□□□□□ -0.73
CAPN1-210ENST00000527699 TEX51A0A1B0GUA7 166 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 UPK3BL1B0FP48 263 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 WASH3PC4AMC7 463 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 UPK3BL2E5RIL1 263 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 NEDD8-MDP1E9PL57 170 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 POLR2DO15514 142 aaKnown RBP10.48□□□□□ -0.73
CAPN1-210ENST00000527699 STX6O43752 255 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 KIF20AO95235 890 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 VNN1O95497 513 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 OLFM2O95897 454 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 HMBSP08397 361 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 HOXB2P14652 356 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 GABRG2P18507 467 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 MAOBP27338 520 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 TNFRSF4P43489 277 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 TOGARAM2Q6ZUX3 1019 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 GPRIN1Q7Z2K8 1008 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 DDX42Q86XP3 938 aaKnown RBP eCLIP10.48□□□□□ -0.73
CAPN1-210ENST00000527699 MARCH9Q86YJ5 346 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 PHTF2Q8N3S3 785 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 CCDC26Q8TAB7 109 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 SMOQ99835 787 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 TRIM4Q9C037 500 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 XYLT2Q9H1B5 865 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 TNMDQ9H2S6 317 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 MMRN2Q9H8L6 949 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 SPHK2Q9NRA0 654 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 KBTBD4Q9NVX7 518 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 EHD2Q9NZN4 543 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 CALCOCO1Q9P1Z2 691 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 DEC1Q9P2X7 70 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 EVLQ9UI08 416 aaPredicted RBP10.48□□□□□ -0.73
CAPN1-210ENST00000527699 MYOFQ9NZM1 2061 aa10.48□□□□□ -0.73
CAPN1-210ENST00000527699 E2F8A0AVK6 867 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 TNFRSF10BO14763 440 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 EIF3DO15371 548 aaKnown RBP eCLIP10.47□□□□□ -0.73
CAPN1-210ENST00000527699 RTN3O95197 1032 aaPredicted RBP10.47□□□□□ -0.73
CAPN1-210ENST00000527699 CCR10P46092 362 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 PPP3CCP48454 512 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 NASPP49321 788 aaPredicted RBP10.47□□□□□ -0.73
CAPN1-210ENST00000527699 AMPD3Q01432 767 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 ZNF667Q5HYK9 610 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 GRAMD4Q6IC98 578 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 KIAA1324Q6UXG2 1013 aaKnown RBP10.47□□□□□ -0.73
CAPN1-210ENST00000527699 UNC13DQ70J99 1090 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 C11orf74Q86VG3 221 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 CACUL1Q86Y37 369 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 SYT12Q8IV01 421 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 SLC41A1Q8IVJ1 513 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 RGL4Q8IZJ4 473 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 C12orf29Q8N999 325 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 PDZD8Q8NEN9 1154 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 ZMIZ2Q8NF64 920 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 SLC2A14Q8TDB8 520 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 SYAP1Q96A49 352 aaPredicted RBP10.47□□□□□ -0.73
CAPN1-210ENST00000527699 C7orf25Q9BPX7 421 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 LRRC27Q9C0I9 530 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 OSER1Q9NX31 292 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 TBC1D14Q9P2M4 693 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 SERTAD1Q9UHV2 236 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 PILRBQ9UKJ0 227 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 ATP8B3O60423 1300 aa10.47□□□□□ -0.73
CAPN1-210ENST00000527699 UBR5O95071 2799 aaPredicted RBP10.47□□□□□ -0.73
CAPN1-210ENST00000527699 PTPRDP23468 1912 aa10.46□□□□□ -0.73
CAPN1-210ENST00000527699 ITPR3Q14573 2671 aa10.46□□□□□ -0.73
CAPN1-210ENST00000527699 A0A1W2PQH9 124 aa10.46□□□□□ -0.73
CAPN1-210ENST00000527699 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.46□□□□□ -0.73
CAPN1-210ENST00000527699 PRRT4C9JH25 899 aa10.46□□□□□ -0.73
CAPN1-210ENST00000527699 CYP26A1O43174 497 aa10.46□□□□□ -0.73
CAPN1-210ENST00000527699 SH3BP5O60239 455 aa10.46□□□□□ -0.73
CAPN1-210ENST00000527699 CUTAO60888 179 aa10.46□□□□□ -0.73
CAPN1-210ENST00000527699 PFKLP17858 780 aa10.46□□□□□ -0.73
CAPN1-210ENST00000527699 NDUFV2P19404 249 aa10.46□□□□□ -0.73
CAPN1-210ENST00000527699 NDST1P52848 882 aa10.46□□□□□ -0.73
CAPN1-210ENST00000527699 ZNF33AQ06730 810 aa10.46□□□□□ -0.73
CAPN1-210ENST00000527699 NCOA4Q13772 614 aa10.46□□□□□ -0.73
CAPN1-210ENST00000527699 ETFBKMTQ8IXQ9 262 aa10.46□□□□□ -0.73
CAPN1-210ENST00000527699 CHPFQ8IZ52 775 aa10.46□□□□□ -0.73
CAPN1-210ENST00000527699 FUKQ8N0W3 1084 aa10.46□□□□□ -0.73
CAPN1-210ENST00000527699 MINDY1Q8N5J2 469 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms