RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 KRT39Q6A163 491 aa23.57■■□□□ 1.36
TRAPPC4-208ENST00000527680 TADA2BQ86TJ2 420 aa23.57■■□□□ 1.36
TRAPPC4-208ENST00000527680 CHPFQ8IZ52 775 aa23.57■■□□□ 1.36
TRAPPC4-208ENST00000527680 BHMTQ93088 406 aa23.57■■□□□ 1.36
TRAPPC4-208ENST00000527680 EEF2KMTQ96G04 330 aa23.57■■□□□ 1.36
TRAPPC4-208ENST00000527680 DUSP16Q9BY84 665 aa23.57■■□□□ 1.36
TRAPPC4-208ENST00000527680 PNPLA8Q9NP80 782 aa23.57■■□□□ 1.36
TRAPPC4-208ENST00000527680 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.57■■□□□ 1.36
TRAPPC4-208ENST00000527680 A0A1W2PQ27 194 aa23.56■■□□□ 1.36
TRAPPC4-208ENST00000527680 A0A1W2PQ64 194 aa23.56■■□□□ 1.36
TRAPPC4-208ENST00000527680 A0A1W2PQD8 194 aa23.56■■□□□ 1.36
TRAPPC4-208ENST00000527680 CHRM1P11229 460 aaPredicted RBP23.56■■□□□ 1.36
TRAPPC4-208ENST00000527680 GTF2H1P32780 548 aa23.56■■□□□ 1.36
TRAPPC4-208ENST00000527680 PSEN1P49768 467 aa23.56■■□□□ 1.36
TRAPPC4-208ENST00000527680 NOVA1P51513 510 aaKnown RBP23.56■■□□□ 1.36
TRAPPC4-208ENST00000527680 KIF11P52732 1056 aa23.56■■□□□ 1.36
TRAPPC4-208ENST00000527680 ENPEPQ07075 957 aa23.56■■□□□ 1.36
TRAPPC4-208ENST00000527680 MAP7D1Q3KQU3 841 aa23.56■■□□□ 1.36
TRAPPC4-208ENST00000527680 TRIM61Q5EBN2 209 aa23.56■■□□□ 1.36
TRAPPC4-208ENST00000527680 MIB1Q86YT6 1006 aa23.56■■□□□ 1.36
TRAPPC4-208ENST00000527680 ERLEC1Q96DZ1 483 aa23.56■■□□□ 1.36
TRAPPC4-208ENST00000527680 NUSAP1Q9BXS6 441 aaKnown RBP23.56■■□□□ 1.36
TRAPPC4-208ENST00000527680 MBD1Q9UIS9 605 aaPredicted RBP23.56■■□□□ 1.36
TRAPPC4-208ENST00000527680 GREM1O60565 184 aa23.55■■□□□ 1.36
TRAPPC4-208ENST00000527680 PTGER3P43115 390 aa23.55■■□□□ 1.36
TRAPPC4-208ENST00000527680 ST3GAL2Q16842 350 aa23.55■■□□□ 1.36
TRAPPC4-208ENST00000527680 EGFLAMQ63HQ2 1017 aa23.55■■□□□ 1.36
TRAPPC4-208ENST00000527680 KLHDC10Q6PID8 442 aa23.55■■□□□ 1.36
TRAPPC4-208ENST00000527680 SYT12Q8IV01 421 aa23.55■■□□□ 1.36
TRAPPC4-208ENST00000527680 DEFB119Q8N690 84 aa23.55■■□□□ 1.36
TRAPPC4-208ENST00000527680 GOLPH3LQ9H4A5 285 aa23.55■■□□□ 1.36
TRAPPC4-208ENST00000527680 PLK2Q9NYY3 685 aa23.55■■□□□ 1.36
TRAPPC4-208ENST00000527680 STARD13Q9Y3M8 1113 aa23.55■■□□□ 1.36
TRAPPC4-208ENST00000527680 CETN3O15182 167 aa23.54■■□□□ 1.36
TRAPPC4-208ENST00000527680 CACNG3O60359 315 aa23.54■■□□□ 1.36
TRAPPC4-208ENST00000527680 STX10O60499 249 aa23.54■■□□□ 1.36
TRAPPC4-208ENST00000527680 KRT37O76014 449 aa23.54■■□□□ 1.36
TRAPPC4-208ENST00000527680 EPB41P11171 864 aaKnown RBP23.54■■□□□ 1.36
TRAPPC4-208ENST00000527680 PMLP29590 882 aa23.54■■□□□ 1.36
TRAPPC4-208ENST00000527680 DGKGP49619 791 aa23.54■■□□□ 1.36
TRAPPC4-208ENST00000527680 LMAN2Q12907 356 aa23.54■■□□□ 1.36
TRAPPC4-208ENST00000527680 LYSMD4Q5XG99 296 aa23.54■■□□□ 1.36
TRAPPC4-208ENST00000527680 SMYD4Q8IYR2 804 aaPredicted RBP23.54■■□□□ 1.36
TRAPPC4-208ENST00000527680 TTC39CQ8N584 583 aa23.54■■□□□ 1.36
TRAPPC4-208ENST00000527680 FBXL13Q8NEE6 735 aa23.54■■□□□ 1.36
TRAPPC4-208ENST00000527680 SEMA4DQ92854 862 aa23.54■■□□□ 1.36
TRAPPC4-208ENST00000527680 ACOX2Q99424 681 aa23.54■■□□□ 1.36
TRAPPC4-208ENST00000527680 GDPD2Q9HCC8 539 aa23.54■■□□□ 1.36
TRAPPC4-208ENST00000527680 RAB20Q9NX57 234 aa23.54■■□□□ 1.36
TRAPPC4-208ENST00000527680 AP5Z1O43299 807 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 HMBSP08397 361 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 GABRG2P18507 467 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 MXI1P50539 228 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 SLC8A3P57103 927 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 COG7P83436 770 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 RPL6Q02878 288 aaKnown RBP23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 EDRF1Q3B7T1 1238 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 SPDYCQ5MJ68 293 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 SH3PXD2AQ5TCZ1 1133 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 TCERG1LQ5VWI1 586 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 SLC36A4Q6YBV0 504 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 TOGARAM2Q6ZUX3 1019 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 CCDC186Q7Z3E2 898 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 SCD5Q86SK9 330 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 TMEM176AQ96HP8 235 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 CDK5RAP1Q96SZ6 601 aaKnown RBP23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 CISHQ9NSE2 258 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 TMEM74BQ9NUR3 256 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 MARK1Q9P0L2 795 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 CALCOCO1Q9P1Z2 691 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 RASAL2Q9UJF2 1139 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 HCN2Q9UL51 889 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 ZNF510Q9Y2H8 683 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 PI4KAP42356 2102 aa23.53■■□□□ 1.36
TRAPPC4-208ENST00000527680 PRRT4C9JH25 899 aa23.52■■□□□ 1.36
TRAPPC4-208ENST00000527680 CDX4O14627 284 aaPredicted RBP23.52■■□□□ 1.36
TRAPPC4-208ENST00000527680 GIPC1O14908 333 aa23.52■■□□□ 1.36
TRAPPC4-208ENST00000527680 STC2O76061 302 aa23.52■■□□□ 1.36
TRAPPC4-208ENST00000527680 DPP6P42658 865 aa23.52■■□□□ 1.36
TRAPPC4-208ENST00000527680 EFEMP1Q12805 493 aa23.52■■□□□ 1.36
TRAPPC4-208ENST00000527680 RSRC2Q7L4I2 434 aaKnown RBP23.52■■□□□ 1.36
TRAPPC4-208ENST00000527680 IPO4Q8TEX9 1081 aaKnown RBP23.52■■□□□ 1.36
TRAPPC4-208ENST00000527680 CLIC5Q9NZA1 410 aa23.52■■□□□ 1.36
TRAPPC4-208ENST00000527680 EVLQ9UI08 416 aaPredicted RBP23.52■■□□□ 1.36
TRAPPC4-208ENST00000527680 USP3Q9Y6I4 520 aa23.52■■□□□ 1.36
TRAPPC4-208ENST00000527680 LAMA1P25391 3075 aa23.52■■□□□ 1.36
TRAPPC4-208ENST00000527680 EPG5Q9HCE0 2579 aa23.51■■□□□ 1.35
TRAPPC4-208ENST00000527680 A0A1W2PQF6 199 aa23.51■■□□□ 1.35
TRAPPC4-208ENST00000527680 CFIP05156 583 aa23.51■■□□□ 1.35
TRAPPC4-208ENST00000527680 ITPKAP23677 461 aa23.51■■□□□ 1.35
TRAPPC4-208ENST00000527680 MAPK8P45983 427 aa23.51■■□□□ 1.35
TRAPPC4-208ENST00000527680 ZCWPW2Q504Y3 356 aa23.51■■□□□ 1.35
TRAPPC4-208ENST00000527680 TATDN2Q93075 761 aa23.51■■□□□ 1.35
TRAPPC4-208ENST00000527680 RMND1Q9NWS8 449 aa23.51■■□□□ 1.35
TRAPPC4-208ENST00000527680 ATXN2Q99700 1313 aaKnown RBP23.51■■□□□ 1.35
TRAPPC4-208ENST00000527680 GOLGA6L4A6NEF3 574 aa23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 ZNF217O75362 1048 aa23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 CISD3P0C7P0 127 aa23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 CHKAP35790 457 aa23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 ATXN3P54252 364 aaPredicted RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms