RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 ZEB1P37275 1124 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-211ENST00000525970 AARSP49588 968 aaKnown RBP eCLIP5.17□□□□□ -1.58
CSDE1-211ENST00000525970 LOXL3P58215 753 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 C21orf58P58505 322 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 LILRA4P59901 499 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 TP53BP2Q13625 1128 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 GRM4Q14833 912 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 DLGAP5Q15398 846 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 SMAD1Q15797 465 aaKnown RBP5.17□□□□□ -1.58
CSDE1-211ENST00000525970 ATPAF1Q5TC12 328 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-211ENST00000525970 B3GNTL1Q67FW5 361 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-211ENST00000525970 ARMC6Q6NXE6 501 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 TAF2Q6P1X5 1199 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 NFRKBQ6P4R8 1299 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 Q6YL49 198 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 RAB11FIP2Q7L804 512 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 ARHGEF19Q8IW93 802 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 LCORLQ8N3X6 602 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 PSD4Q8NDX1 1056 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 SUPT20HQ8NEM7 779 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 BPIFB1Q8TDL5 484 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 CSGALNACT1Q8TDX6 532 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 SMCR8Q8TEV9 937 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-211ENST00000525970 NTN5Q8WTR8 489 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-211ENST00000525970 ERP27Q96DN0 273 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 RRP36Q96EU6 259 aaKnown RBP5.17□□□□□ -1.58
CSDE1-211ENST00000525970 TRAPPC9Q96Q05 1148 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 TRIB1Q96RU8 372 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 WDR11Q9BZH6 1224 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 TTYH3Q9C0H2 523 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 SLC25A32Q9H2D1 315 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 SERHL2Q9H4I8 314 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 EPS8L2Q9H6S3 715 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 SYNPO2LQ9H987 977 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 SEPSECSQ9HD40 501 aaKnown RBP5.17□□□□□ -1.58
CSDE1-211ENST00000525970 TMOD4Q9NZQ9 345 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 CTTNBP2NLQ9P2B4 639 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 POLG2Q9UHN1 485 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 CDYLQ9Y232 598 aa5.17□□□□□ -1.58
CSDE1-211ENST00000525970 A0A087X0M5 115 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 CCDC196A0A1B0GTZ2 297 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 A0A1B0GX30 115 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 CCDC78A2IDD5 438 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 K7ENM7 598 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 CD3EAPO15446 510 aaKnown RBP5.16□□□□□ -1.58
CSDE1-211ENST00000525970 ZNF500O60304 480 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-211ENST00000525970 CBFA2T3O75081 653 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 SPDEFO95238 335 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 VIPP01282 170 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 AVPR1BP47901 424 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 GCLCP48506 637 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-211ENST00000525970 ATXN1P54253 815 aaKnown RBP5.16□□□□□ -1.58
CSDE1-211ENST00000525970 DCAF7P61962 342 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 CXADRP78310 365 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 PIGFQ07326 219 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 MYO1EQ12965 1108 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 PRKG2Q13237 762 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 PDE1CQ14123 709 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-211ENST00000525970 PTCHD3Q3KNS1 767 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 SPATA1Q5VX52 437 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 TAPT1Q6NXT6 567 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 C4orf50Q6ZRC1 276 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 WDR24Q96S15 920 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 SMOQ99835 787 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 ADAM2Q99965 735 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 GALNT9Q9HCQ5 603 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 PREBQ9HCU5 417 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 ADARB2Q9NS39 739 aaKnown RBP5.16□□□□□ -1.58
CSDE1-211ENST00000525970 HSFX1Q9UBD0 423 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 TESQ9UGI8 421 aaKnown RBP5.16□□□□□ -1.58
CSDE1-211ENST00000525970 KCNE5Q9UJ90 142 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 C19orf53Q9UNZ5 99 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-211ENST00000525970 RABGAP1Q9Y3P9 1069 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 FER1L4A9Z1Z3 1794 aa5.16□□□□□ -1.58
CSDE1-211ENST00000525970 FAM90A20PA6NIJ5 464 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 MARCH11A6NNE9 402 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 J3KTA2 159 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 TAF5LO75529 589 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 SRGAP2BP0DMP2 458 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 ITGAMP11215 1152 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 ZNF844Q08AG5 666 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 GPS1Q13098 491 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 SLC12A1Q13621 1099 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 TOMM20Q15388 145 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 BTBD16Q32M84 506 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 SLC9C2Q5TAH2 1124 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 CACHD1Q5VU97 1274 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 RRAGAQ7L523 313 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 Q8NA96 180 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 NGDNQ8NEJ9 315 aaKnown RBP5.15□□□□□ -1.59
CSDE1-211ENST00000525970 MBD3L2Q8NHZ7 208 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-211ENST00000525970 HVCN1Q96D96 273 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 BOD1Q96IK1 185 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 ZNF668Q96K58 619 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-211ENST00000525970 COQ10AQ96MF6 247 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 TREX2Q9BQ50 279 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-211ENST00000525970 REEP2Q9BRK0 252 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 NUDT22Q9BRQ3 303 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 CHCHD6Q9BRQ6 235 aa5.15□□□□□ -1.59
CSDE1-211ENST00000525970 SMOC2Q9H3U7 446 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms