RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 GMIPQ9P107 970 aa13.23□□□□□ -0.29
CCDC90B-205ENST00000525916 USP36Q9P275 1121 aaKnown RBP13.23□□□□□ -0.29
CCDC90B-205ENST00000525916 TFIP11Q9UBB9 837 aaKnown RBP13.23□□□□□ -0.29
CCDC90B-205ENST00000525916 BTBD3Q9Y2F9 522 aa13.23□□□□□ -0.29
CCDC90B-205ENST00000525916 ATP6V1DQ9Y5K8 247 aa13.23□□□□□ -0.29
CCDC90B-205ENST00000525916 PTPRQQ9UMZ3 2332 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 KCNJ18B7U540 433 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 FLRT2O43155 660 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 GAP43P17677 238 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 ABCG1P45844 678 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 TUBP50607 506 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 SLC5A3P53794 718 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 DNM1Q05193 864 aaKnown RBP13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 HLA-BQ31612 363 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 FUT11Q495W5 492 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 DCAF12L1Q5VU92 463 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 USP49Q70CQ1 688 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 CBWD2Q8IUF1 395 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 GALNT15Q8N3T1 639 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 B3GALNT2Q8NCR0 500 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 RHBDD1Q8TEB9 315 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 BHMTQ93088 406 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 DNAJC19Q96DA6 116 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 EPSTI1Q96J88 318 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 XPO6Q96QU8 1125 aaKnown RBP13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 CDC6Q99741 560 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 NACA2Q9H009 215 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 FBXO2Q9UK22 296 aaPredicted RBP13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 CFAP45Q9UL16 551 aa13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 SRPRBQ9Y5M8 271 aaKnown RBP13.22□□□□□ -0.29
CCDC90B-205ENST00000525916 KALRNO60229 2985 aa13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 A0A1B0GVT2 93 aa13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 BCAT2O15382 392 aaPredicted RBP13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 GREM1O60565 184 aa13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 PPP6R2O75170 966 aa13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 TACC1O75410 805 aa13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 PRPF6O94906 941 aaKnown RBP13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 DGKGP49619 791 aa13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 PGFP49763 221 aa13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 CEBPZQ03701 1054 aaKnown RBP13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 DUOXA2Q1HG44 320 aa13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 CCDC157Q569K6 752 aa13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 SNX30Q5VWJ9 437 aa13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 SLC39A7Q92504 469 aa13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 MKRN2Q9H000 416 aaKnown RBP13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 OLFML3Q9NRN5 406 aa13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 CHMP5Q9NZZ3 219 aa13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 STK17AQ9UEE5 414 aa13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 EIF2B4Q9UI10 523 aaKnown RBP13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 RCOR1Q9UKL0 485 aa13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 NFE2L3Q9Y4A8 694 aa13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 PCDHB13Q9Y5F0 798 aa13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 STON1Q9Y6Q2 735 aa13.21□□□□□ -0.29
CCDC90B-205ENST00000525916 COL5A1P20908 1838 aaPredicted RBP13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 ZNF233A6NK53 670 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 A8MXQ7 604 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 GFRA2O00451 464 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 SPTLC2O15270 562 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 CST3P01034 146 aaPredicted RBP13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 ZDHHC11BP0C7U3 371 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 IDEP14735 1019 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 ITPKBP27987 946 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 TPMTP51580 245 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 TNNC1P63316 161 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 STARD3Q14849 445 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 STK38Q15208 465 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 WDR72Q3MJ13 1102 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 FOXD4L6Q3SYB3 417 aaPredicted RBP13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 IL27RAQ6UWB1 636 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 FOXD4L3Q6VB84 417 aaPredicted RBP13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 DBX2Q6ZNG2 339 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 HTR3DQ70Z44 454 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 TRAPPC11Q7Z392 1133 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 FAM35AQ86V20 835 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 CACUL1Q86Y37 369 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 WDR49Q8IV35 697 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 CADM4Q8NFZ8 388 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 ITM2CQ9NQX7 267 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 PLK2Q9NYY3 685 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 MARK1Q9P0L2 795 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 PCDHGB2Q9Y5G2 931 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 SLCO1B1Q9Y6L6 691 aa13.2□□□□□ -0.3
CCDC90B-205ENST00000525916 METTL12A8MUP2 240 aa13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 TLR5O60602 858 aa13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 TBX18O95935 607 aa13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 CISD3P0C7P0 127 aa13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 PLA2G2AP14555 144 aa13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 CSNK1EP49674 416 aaKnown RBP13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 KRT85P78386 507 aa13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 ALCAMQ13740 583 aa13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 SURF1Q15526 300 aa13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 DHRS13Q6UX07 377 aa13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 PAQR9Q6ZVX9 377 aa13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 METTL3Q86U44 580 aaKnown RBP13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 PDCD7Q8N8D1 485 aaKnown RBP13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 C1orf216Q8TAB5 229 aa13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 SNX19Q92543 992 aa13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 P2RY11Q96G91 374 aa13.19□□□□□ -0.3
CCDC90B-205ENST00000525916 MED10Q9BTT4 135 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms