RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 ATP5C1P36542 298 aaKnown RBP25.28■■□□□ 1.64
USP47-205ENST00000525257 GOLGA8FQ08AF8 430 aa25.28■■□□□ 1.64
USP47-205ENST00000525257 GOLGA8DPQ0D2H9 430 aa25.28■■□□□ 1.64
USP47-205ENST00000525257 SGSM1Q2NKQ1 1148 aa25.28■■□□□ 1.64
USP47-205ENST00000525257 RABEPKQ7Z6M1 372 aa25.28■■□□□ 1.64
USP47-205ENST00000525257 MINDY1Q8N5J2 469 aa25.28■■□□□ 1.64
USP47-205ENST00000525257 ZCCHC14Q8WYQ9 949 aaKnown RBP25.28■■□□□ 1.64
USP47-205ENST00000525257 HSPA12BQ96MM6 686 aa25.28■■□□□ 1.64
USP47-205ENST00000525257 SLC6A17Q9H1V8 727 aa25.28■■□□□ 1.64
USP47-205ENST00000525257 CD93Q9NPY3 652 aa25.28■■□□□ 1.64
USP47-205ENST00000525257 CYLDQ9NQC7 956 aa25.28■■□□□ 1.64
USP47-205ENST00000525257 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.28■■□□□ 1.64
USP47-205ENST00000525257 DMAC2Q9NW81 257 aa25.28■■□□□ 1.64
USP47-205ENST00000525257 CACNA2D2Q9NY47 1150 aa25.28■■□□□ 1.64
USP47-205ENST00000525257 MARK1Q9P0L2 795 aa25.28■■□□□ 1.64
USP47-205ENST00000525257 WDR35Q9P2L0 1181 aa25.28■■□□□ 1.64
USP47-205ENST00000525257 NEUROG3Q9Y4Z2 214 aa25.28■■□□□ 1.64
USP47-205ENST00000525257 MDM4O15151 490 aa25.27■■□□□ 1.64
USP47-205ENST00000525257 ZNF217O75362 1048 aa25.27■■□□□ 1.64
USP47-205ENST00000525257 ME1P48163 572 aa25.27■■□□□ 1.64
USP47-205ENST00000525257 STK4Q13043 487 aa25.27■■□□□ 1.64
USP47-205ENST00000525257 ZACNQ401N2 412 aa25.27■■□□□ 1.64
USP47-205ENST00000525257 RESP18Q5W5W9 173 aa25.27■■□□□ 1.64
USP47-205ENST00000525257 UNC93AQ86WB7 457 aa25.27■■□□□ 1.64
USP47-205ENST00000525257 TRIML1Q8N9V2 468 aa25.27■■□□□ 1.64
USP47-205ENST00000525257 KIAA0895Q8NCT3 520 aa25.27■■□□□ 1.64
USP47-205ENST00000525257 BHMTQ93088 406 aa25.27■■□□□ 1.64
USP47-205ENST00000525257 GABRG3Q99928 467 aa25.27■■□□□ 1.64
USP47-205ENST00000525257 NUDT5Q9UKK9 219 aa25.27■■□□□ 1.64
USP47-205ENST00000525257 PCDHA7Q9UN72 937 aa25.27■■□□□ 1.64
USP47-205ENST00000525257 SCML2Q9UQR0 700 aa25.27■■□□□ 1.64
USP47-205ENST00000525257 ARHGAP33O14559 1287 aa25.26■■□□□ 1.63
USP47-205ENST00000525257 KLRC4O43908 158 aa25.26■■□□□ 1.63
USP47-205ENST00000525257 RPN1P04843 607 aaKnown RBP25.26■■□□□ 1.63
USP47-205ENST00000525257 ASPAP45381 313 aa25.26■■□□□ 1.63
USP47-205ENST00000525257 DGKGP49619 791 aa25.26■■□□□ 1.63
USP47-205ENST00000525257 CLEC20AQ6ZU45 233 aa25.26■■□□□ 1.63
USP47-205ENST00000525257 SLC9A9Q8IVB4 645 aa25.26■■□□□ 1.63
USP47-205ENST00000525257 CEP57L1Q8IYX8 460 aa25.26■■□□□ 1.63
USP47-205ENST00000525257 TAF4BQ92750 862 aa25.26■■□□□ 1.63
USP47-205ENST00000525257 NMUR1Q9HB89 426 aa25.26■■□□□ 1.63
USP47-205ENST00000525257 EXOC1Q9NV70 894 aa25.26■■□□□ 1.63
USP47-205ENST00000525257 SERTAD1Q9UHV2 236 aa25.26■■□□□ 1.63
USP47-205ENST00000525257 A0A1W2PQH9 124 aa25.25■■□□□ 1.63
USP47-205ENST00000525257 SRRM3A6NNA2 597 aaPredicted RBP25.25■■□□□ 1.63
USP47-205ENST00000525257 HHLA1C9JL84 531 aa25.25■■□□□ 1.63
USP47-205ENST00000525257 ASS1P00966 412 aaKnown RBP25.25■■□□□ 1.63
USP47-205ENST00000525257 ACO1P21399 889 aaKnown RBP25.25■■□□□ 1.63
USP47-205ENST00000525257 PIK3CAP42336 1068 aa25.25■■□□□ 1.63
USP47-205ENST00000525257 FAM193AP78312 1265 aa25.25■■□□□ 1.63
USP47-205ENST00000525257 SV2AQ7L0J3 742 aa25.25■■□□□ 1.63
USP47-205ENST00000525257 RGL4Q8IZJ4 473 aa25.25■■□□□ 1.63
USP47-205ENST00000525257 TWNKQ96RR1 684 aa25.25■■□□□ 1.63
USP47-205ENST00000525257 PLK2Q9NYY3 685 aa25.25■■□□□ 1.63
USP47-205ENST00000525257 DMXL2Q8TDJ6 3036 aa25.24■■□□□ 1.63
USP47-205ENST00000525257 DSPP15924 2871 aaKnown RBP25.24■■□□□ 1.63
USP47-205ENST00000525257 NDUFS2O75306 463 aa25.24■■□□□ 1.63
USP47-205ENST00000525257 HLA-DRAP01903 254 aa25.24■■□□□ 1.63
USP47-205ENST00000525257 NR3C1P04150 777 aa25.24■■□□□ 1.63
USP47-205ENST00000525257 RARGP13631 454 aa25.24■■□□□ 1.63
USP47-205ENST00000525257 C10orf120Q5SQS8 335 aa25.24■■□□□ 1.63
USP47-205ENST00000525257 KIAA1324Q6UXG2 1013 aaKnown RBP25.24■■□□□ 1.63
USP47-205ENST00000525257 MRGPRX1Q96LB2 322 aa25.24■■□□□ 1.63
USP47-205ENST00000525257 HNRNPABQ99729 332 aaKnown RBP25.24■■□□□ 1.63
USP47-205ENST00000525257 KCTD10Q9H3F6 313 aa25.24■■□□□ 1.63
USP47-205ENST00000525257 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.24■■□□□ 1.63
USP47-205ENST00000525257 MSRB2Q9Y3D2 182 aa25.24■■□□□ 1.63
USP47-205ENST00000525257 ATRXP46100 2492 aa25.24■■□□□ 1.63
USP47-205ENST00000525257 A0A1W2PQD8 194 aa25.23■■□□□ 1.63
USP47-205ENST00000525257 WASH3PC4AMC7 463 aa25.23■■□□□ 1.63
USP47-205ENST00000525257 SYPP08247 313 aa25.23■■□□□ 1.63
USP47-205ENST00000525257 CISD3P0C7P0 127 aa25.23■■□□□ 1.63
USP47-205ENST00000525257 CD59P13987 128 aa25.23■■□□□ 1.63
USP47-205ENST00000525257 TRIM21P19474 475 aaKnown RBP25.23■■□□□ 1.63
USP47-205ENST00000525257 KMT5BQ4FZB7 885 aa25.23■■□□□ 1.63
USP47-205ENST00000525257 CEP135Q66GS9 1140 aa25.23■■□□□ 1.63
USP47-205ENST00000525257 TMC2Q8TDI7 906 aa25.23■■□□□ 1.63
USP47-205ENST00000525257 CYFIP2Q96F07 1278 aa25.23■■□□□ 1.63
USP47-205ENST00000525257 BACH2Q9BYV9 841 aa25.23■■□□□ 1.63
USP47-205ENST00000525257 DNMT3LQ9UJW3 386 aa25.23■■□□□ 1.63
USP47-205ENST00000525257 PCDHA5Q9Y5H7 936 aa25.23■■□□□ 1.63
USP47-205ENST00000525257 PLA2G4AP47712 749 aa25.22■■□□□ 1.63
USP47-205ENST00000525257 INCA1Q0VD86 236 aa25.22■■□□□ 1.63
USP47-205ENST00000525257 PLEKHG6Q3KR16 790 aa25.22■■□□□ 1.63
USP47-205ENST00000525257 C1orf220Q5T0J3 134 aa25.22■■□□□ 1.63
USP47-205ENST00000525257 Q6ZNB5 142 aa25.22■■□□□ 1.63
USP47-205ENST00000525257 CHCHD4Q8N4Q1 142 aa25.22■■□□□ 1.63
USP47-205ENST00000525257 TMEM174Q8WUU8 243 aa25.22■■□□□ 1.63
USP47-205ENST00000525257 P2RY11Q96G91 374 aa25.22■■□□□ 1.63
USP47-205ENST00000525257 ZNF419Q96HQ0 510 aaPredicted RBP25.22■■□□□ 1.63
USP47-205ENST00000525257 NAGPAQ9UK23 515 aa25.22■■□□□ 1.63
USP47-205ENST00000525257 GFRA2O00451 464 aa25.21■■□□□ 1.63
USP47-205ENST00000525257 PDXKO00764 312 aa25.21■■□□□ 1.63
USP47-205ENST00000525257 ACTN4O43707 911 aaKnown RBP25.21■■□□□ 1.63
USP47-205ENST00000525257 SLFN14P0C7P3 912 aa25.21■■□□□ 1.63
USP47-205ENST00000525257 RDXP35241 583 aaKnown RBP25.21■■□□□ 1.63
USP47-205ENST00000525257 KLHDC10Q6PID8 442 aa25.21■■□□□ 1.63
USP47-205ENST00000525257 PAGE5Q96GU1 130 aa25.21■■□□□ 1.63
USP47-205ENST00000525257 CAMK1GQ96NX5 476 aa25.21■■□□□ 1.63
USP47-205ENST00000525257 NT5C1AQ9BXI3 368 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms