RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 KLF16Q9BXK1 252 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 SLC4A5Q9BY07 1137 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 OSBPL6Q9BZF3 934 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 EDEM3Q9BZQ6 932 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 RNF38Q9H0F5 515 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 IRF2BPLQ9H1B7 796 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 ECT2Q9H8V3 914 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 FAM204AQ9H8W3 233 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 NMUR1Q9HB89 426 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 POPDC2Q9HBU9 364 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 LTB4R2Q9NPC1 389 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 ACP6Q9NPH0 428 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 TMEM51Q9NW97 253 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 GTSE1Q9NYZ3 720 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 IFNKQ9P0W0 207 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 NUDT5Q9UKK9 219 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 NDRG2Q9UN36 371 aaKnown RBP5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 PAXBP1Q9Y5B6 917 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 XIRP2A4UGR9 3374 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 LRRC53A6NM62 1247 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 ARNTLO00327 626 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 SCAMP3O14828 347 aaKnown RBP5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 MDM4O15151 490 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 EPHB6O15197 1021 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 TEX33O43247 280 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 LATS1O95835 1130 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 TBX18O95935 607 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 PDGFBP01127 241 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 APOEP02649 317 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 MMEP08473 750 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 SLC2A3P11169 496 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 AVPR2P30518 371 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 CORO1AP31146 461 aaKnown RBP5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 SOX9P48436 509 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 TBX4P57082 545 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 CDK17Q00537 523 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 GAD2Q05329 585 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 NNTQ13423 1086 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 NR1I3Q14994 352 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 E2F5Q15329 346 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 TRIP4Q15650 581 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 ANO4Q32M45 955 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 EML3Q32P44 896 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 TDRD12Q587J7 1177 aaKnown RBP5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 DCAF6Q58WW2 860 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 FIGNQ5HY92 759 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 DGKKQ5KSL6 1271 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 FAM102AQ5T9C2 384 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 NAA35Q5VZE5 725 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 CWF19L1Q69YN2 538 aaKnown RBP5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 MSANTD2Q6P1R3 559 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 POTEHQ6S545 545 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 HTR3DQ70Z44 454 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 SND1Q7KZF4 910 aaKnown RBP eCLIP5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 BEND5Q7L4P6 421 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 TMEM110Q86TL2 294 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 CCDC117Q8IWD4 279 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 UNC45BQ8IWX7 931 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 BBS7Q8IWZ6 715 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 NDRG1Q92597 394 aaKnown RBP5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 CD101Q93033 1021 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 RNF34Q969K3 372 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 C18orf8Q96DM3 657 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 ZFRQ96KR1 1074 aaKnown RBP5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 NAP1L5Q96NT1 182 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 LRRC3BQ96PB8 259 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 XPO6Q96QU8 1125 aaKnown RBP5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 CPXM1Q96SM3 734 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 P2RY13Q9BPV8 354 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 FOXQ1Q9C009 403 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 KCNH6Q9H252 994 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 C11orf16Q9NQ32 467 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 HPS4Q9NQG7 708 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 ZNHIT6Q9NWK9 470 aaKnown RBP5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 ASNSD1Q9NWL6 643 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 OSER1Q9NX31 292 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 RRN3Q9NYV6 651 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 WDR35Q9P2L0 1181 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 SLC12A6Q9UHW9 1150 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 STAP1Q9ULZ2 295 aa5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 BZW2Q9Y6E2 419 aaKnown RBP5.64□□□□□ -1.51
HMGB1P40-201ENST00000525121 PATJQ8NI35 1801 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 PRUNE2Q8WUY3 3088 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 NUP210Q8TEM1 1887 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 A0A1W2PQJ5 194 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 NEDD8-MDP1E9PL57 170 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 GOLGA8SH3BPF8 625 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 HOXC11O43248 304 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 PAPSS1O43252 624 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 MSI1O43347 362 aaKnown RBP5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 LAMTOR5O43504 91 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 ATG13O75143 517 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 DAB1O75553 588 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 STC2O76061 302 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 ERBB2P04626 1255 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 APODP05090 189 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 CYP17A1P05093 508 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 CALB1P05937 261 aa5.63□□□□□ -1.51
HMGB1P40-201ENST00000525121 DCNP07585 359 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms