RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 TTYH3Q9C0H2 523 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 KLHL4Q9C0H6 718 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 TTYH1Q9H313 450 aaPredicted RBP5.85□□□□□ -1.47
USP47-204ENST00000525078 BCAS3Q9H6U6 928 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 DECR2Q9NUI1 292 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 COQ3Q9NZJ6 369 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 EHD2Q9NZN4 543 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 USP22Q9UPT9 525 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 CDY1Q9Y6F8 540 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 KDM3AQ9Y4C1 1321 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 LIPT2A6NK58 231 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 A8MXE2 369 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 VPS4BO75351 444 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 ENTPD3O75355 529 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 HAUS5O94927 633 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 IL18BPO95998 194 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 CHEK2O96017 543 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 LMNAP02545 664 aaKnown RBP5.84□□□□□ -1.47
USP47-204ENST00000525078 CYP21A2P08686 494 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 ALAS1P13196 640 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 TLX1P31314 330 aaPredicted RBP5.84□□□□□ -1.47
USP47-204ENST00000525078 MSX2P35548 267 aaPredicted RBP5.84□□□□□ -1.47
USP47-204ENST00000525078 BUD31P41223 144 aaPredicted RBP5.84□□□□□ -1.47
USP47-204ENST00000525078 GARSP41250 739 aaKnown RBP5.84□□□□□ -1.47
USP47-204ENST00000525078 CDK7P50613 346 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 ALDH3A2P51648 485 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 SLC12A2P55011 1212 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 PRR5P85299 388 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 TNFAIP1Q13829 316 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 BOP1Q14137 746 aaKnown RBP5.84□□□□□ -1.47
USP47-204ENST00000525078 SLMAPQ14BN4 828 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 CR1LQ2VPA4 569 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 TBRG1Q3YBR2 411 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 CC2D1BQ5T0F9 858 aaKnown RBP5.84□□□□□ -1.47
USP47-204ENST00000525078 UTP14CQ5TAP6 766 aaKnown RBP5.84□□□□□ -1.47
USP47-204ENST00000525078 OTUD7BQ6GQQ9 843 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 ZNF529Q6P280 563 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 MTFR2Q6P444 385 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 TMEM154Q6P9G4 183 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 KLHL35Q6PF15 583 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 CRELD2Q6UXH1 353 aaPredicted RBP5.84□□□□□ -1.47
USP47-204ENST00000525078 DENND5BQ6ZUT9 1274 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 SEM1Q6ZVN7 128 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 TRABD2AQ86V40 505 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 NLRP14Q86W24 1093 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 METTL23Q86XA0 190 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 MIB1Q86YT6 1006 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 BCL6BQ8N143 479 aaPredicted RBP5.84□□□□□ -1.47
USP47-204ENST00000525078 POGLUT1Q8NBL1 392 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 OR6J1Q8NGC5 347 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 GSDMBQ8TAX9 411 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 SH3RF3Q8TEJ3 882 aaPredicted RBP5.84□□□□□ -1.47
USP47-204ENST00000525078 DEPDC1BQ8WUY9 529 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 POMGNT1Q8WZA1 660 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 GFM2Q969S9 779 aaKnown RBP5.84□□□□□ -1.47
USP47-204ENST00000525078 RMDN1Q96DB5 314 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 PGAP3Q96FM1 320 aaPredicted RBP5.84□□□□□ -1.47
USP47-204ENST00000525078 CMTM3Q96MX0 182 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 LENG8Q96PV6 779 aaPredicted RBP5.84□□□□□ -1.47
USP47-204ENST00000525078 PPP1R10Q96QC0 940 aaKnown RBP5.84□□□□□ -1.47
USP47-204ENST00000525078 PIP5K1AQ99755 562 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 MESP1Q9BRJ9 268 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 ANP32EQ9BTT0 268 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 MRI1Q9BV20 369 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 TEX12Q9BXU0 123 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 SLC46A2Q9BY10 475 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 MROH8Q9H579 483 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 COPS7BQ9H9Q2 264 aaPredicted RBP5.84□□□□□ -1.47
USP47-204ENST00000525078 CYP4F11Q9HBI6 524 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 KCND2Q9NZV8 630 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 DNAJB11Q9UBS4 358 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 SLC23A1Q9UHI7 598 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 TMEM59LQ9UK28 342 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 RABL2BQ9UNT1 228 aa5.84□□□□□ -1.47
USP47-204ENST00000525078 MTF2Q9Y483 593 aaPredicted RBP5.84□□□□□ -1.47
USP47-204ENST00000525078 FITM1A5D6W6 292 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 CCDC69A6NI79 296 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 HLA-DPA1P20036 260 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 FGFR4P22455 802 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 SLC6A4P31645 630 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 ARL1P40616 181 aaPredicted RBP5.83□□□□□ -1.48
USP47-204ENST00000525078 RRP1P56182 461 aaKnown RBP5.83□□□□□ -1.48
USP47-204ENST00000525078 RPL7AP62424 266 aaKnown RBP5.83□□□□□ -1.48
USP47-204ENST00000525078 GOLGA8DPQ0D2H9 430 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 CAMK2DQ13557 499 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 KCNB1Q14721 858 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 IQCB1Q15051 598 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 NTRK2Q16620 822 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 C5orf22Q49AR2 442 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 PARP10Q53GL7 1025 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 FAM47AQ5JRC9 791 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 ERMARDQ5T6L9 678 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 TMEM200BQ69YZ2 307 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 RAB12Q6IQ22 244 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 KRT80Q6KB66 452 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 DENND1BQ6P3S1 775 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 SLC2A7Q6PXP3 512 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 MCM10Q7L590 875 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 ZNF804AQ7Z570 1209 aa5.83□□□□□ -1.48
USP47-204ENST00000525078 AMIGO3Q86WK7 504 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms