RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 SHOC2Q9UQ13 582 aa3.88□□□□□ -1.79
LINCR-0001-203ENST00000524047 MED16Q9Y2X0 877 aa3.88□□□□□ -1.79
LINCR-0001-203ENST00000524047 LAMB4A4D0S4 1761 aa3.88□□□□□ -1.79
LINCR-0001-203ENST00000524047 AFDNP55196 1824 aaKnown RBP3.88□□□□□ -1.79
LINCR-0001-203ENST00000524047 RGS12O14924 1447 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 ABCA3Q99758 1704 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 STRCQ7RTU9 1775 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 VGLL3A8MV65 326 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 hCG_1984214I3L0E3 225 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 QSOX1O00391 747 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 SLC16A3O15427 465 aaKnown RBP3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 CTNND1O60716 968 aaKnown RBP3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 RFPL1O75677 317 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 S100BP04271 92 aaPredicted RBP3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 FESP07332 822 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 CELA2AP08217 269 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 IL6RP08887 468 aaPredicted RBP3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 JUPP14923 745 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 NPR1P16066 1061 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 PCSK6P29122 969 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 CYP2C18P33260 490 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 LIPAP38571 399 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 VIPR2P41587 438 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 CCT4P50991 539 aaKnown RBP3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 PDE1AP54750 535 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 KRT17Q04695 432 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 PLEKHG6Q3KR16 790 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 CCDC30Q5VVM6 783 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 LMBRD2Q68DH5 695 aaPredicted RBP3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 ZNF783Q6ZMS7 281 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 FAM43BQ6ZT52 329 aaPredicted RBP3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 MCM10Q7L590 875 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 DTX2Q86UW9 622 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 CHD1LQ86WJ1 897 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 MPP5Q8N3R9 675 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 LRRC71Q8N4P6 559 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 DNAJC5GQ8N7S2 189 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 Q8N9P0 234 aaPredicted RBP3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 ATG4AQ8WYN0 398 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 CAMKK2Q96RR4 588 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 STK31Q9BXU1 1019 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 B3GNT5Q9BYG0 378 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 TSPYL1Q9H0U9 437 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 GLOD4Q9HC38 313 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 SH3BP4Q9P0V3 963 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 ZNF70Q9UC06 446 aaPredicted RBP3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 CCNL1Q9UK58 526 aaPredicted RBP3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 NDRG4Q9ULP0 352 aaKnown RBP3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 SSX2IPQ9Y2D8 614 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 MRPS17Q9Y2R5 130 aaKnown RBP3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 USP19O94966 1318 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 C5P01031 1676 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 MSH6P52701 1360 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 CEMIPQ8WUJ3 1361 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 ATP10DQ9P241 1426 aa3.87□□□□□ -1.79
LINCR-0001-203ENST00000524047 C1orf167Q5SNV9 1468 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 BTN3A1O00481 513 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 HMMRO75330 724 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 SCGB1D2O95969 90 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 PRKCGP05129 697 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 THP07101 528 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 HOXB7P09629 217 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 FAM163BP0C2L3 166 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 ENGP17813 658 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 KRTAP10-9P60411 292 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 E2F2Q14209 437 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 LRRC41Q15345 812 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 TAF7Q15545 349 aaPredicted RBP3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 ANO6Q4KMQ2 910 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 BMP2KLQ5H9B9 411 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 DEPDC1Q5TB30 811 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 SUMO4Q6EEV6 95 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 ZNF425Q6IV72 752 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 NPNTQ6UXI9 565 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 SLC29A4Q7RTT9 530 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 OVCH2Q7RTZ1 564 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 COL23A1Q86Y22 540 aaPredicted RBP3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 ZNF280BQ86YH2 543 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 CHPFQ8IZ52 775 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 ANKRD44Q8N8A2 993 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 C9orf106Q8NAJ2 232 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 FANCBQ8NB91 859 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 OR6B3Q8NGW1 331 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 XAGE5Q8WWM1 108 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 RAPGEF4Q8WZA2 1011 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 DDB2Q92466 427 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 GLG1Q92896 1179 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 R3HDM4Q96D70 268 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 CCDC94Q9BW85 323 aaPredicted RBP3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 TRIM54Q9BYV2 358 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 MS4A7Q9GZW8 240 aaPredicted RBP3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 DCTPP1Q9H773 170 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 CXorf36Q9H7Y0 433 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 ISY1Q9ULR0 285 aaKnown RBP3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 AOX1Q06278 1338 aa3.86□□□□□ -1.79
LINCR-0001-203ENST00000524047 NHSL1Q5SYE7 1610 aa3.85□□□□□ -1.79
LINCR-0001-203ENST00000524047 UBR2Q8IWV8 1755 aa3.85□□□□□ -1.79
LINCR-0001-203ENST00000524047 ARFGEF2Q9Y6D5 1785 aa3.85□□□□□ -1.79
LINCR-0001-203ENST00000524047 A1L4Q6 167 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms