RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 GTSE1Q9NYZ3 720 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 MARCH2Q9P0N8 246 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 RASAL2Q9UJF2 1139 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 ZNF510Q9Y2H8 683 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 SIT1Q9Y3P8 196 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 HBS1LQ9Y450 684 aaKnown RBP13.15□□□□□ -0.3
VEGFA-225ENST00000523950 WNT6Q9Y6F9 365 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 E5RJQ4 531 aa13.14□□□□□ -0.31
VEGFA-225ENST00000523950 TPM3P06753 285 aa13.14□□□□□ -0.31
VEGFA-225ENST00000523950 FERP16591 822 aa13.14□□□□□ -0.31
VEGFA-225ENST00000523950 UBASH3AP57075 661 aa13.14□□□□□ -0.31
VEGFA-225ENST00000523950 CDR2Q01850 454 aa13.14□□□□□ -0.31
VEGFA-225ENST00000523950 TNK2Q07912 1038 aa13.14□□□□□ -0.31
VEGFA-225ENST00000523950 TRIM68Q6AZZ1 485 aa13.14□□□□□ -0.31
VEGFA-225ENST00000523950 TOGARAM2Q6ZUX3 1019 aa13.14□□□□□ -0.31
VEGFA-225ENST00000523950 NOP9Q86U38 636 aaKnown RBP13.14□□□□□ -0.31
VEGFA-225ENST00000523950 PASD1Q8IV76 773 aa13.14□□□□□ -0.31
VEGFA-225ENST00000523950 C1orf131Q8NDD1 294 aaKnown RBP13.14□□□□□ -0.31
VEGFA-225ENST00000523950 TTC16Q8NEE8 873 aa13.14□□□□□ -0.31
VEGFA-225ENST00000523950 PLD4Q96BZ4 506 aa13.14□□□□□ -0.31
VEGFA-225ENST00000523950 NUP58Q9BVL2 599 aa13.14□□□□□ -0.31
VEGFA-225ENST00000523950 ASNSD1Q9NWL6 643 aa13.14□□□□□ -0.31
VEGFA-225ENST00000523950 CYTH4Q9UIA0 394 aa13.14□□□□□ -0.31
VEGFA-225ENST00000523950 NOCTQ9UK39 431 aaKnown RBP13.14□□□□□ -0.31
VEGFA-225ENST00000523950 HCN4Q9Y3Q4 1203 aa13.14□□□□□ -0.31
VEGFA-225ENST00000523950 COL4A3Q01955 1670 aa13.14□□□□□ -0.31
VEGFA-225ENST00000523950 SHISA7A6NL88 538 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 PIK3R2O00459 728 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 PAPSS1O43252 624 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-225ENST00000523950 STC2O76061 302 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 ADH1CP00326 375 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 ARSAP15289 507 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 SCNN1AP37088 669 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 EFEMP1Q12805 493 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 NNTQ13423 1086 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 LRRC32Q14392 662 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 UBXN2BQ14CS0 331 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 EFHC1Q5JVL4 640 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 MIB1Q86YT6 1006 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 SCUBE3Q8IX30 993 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 CCDC105Q8IYK2 499 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 ADGRG2Q8IZP9 1017 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 TMEM105Q8N8V8 129 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 NDRG1Q92597 394 aaKnown RBP13.13□□□□□ -0.31
VEGFA-225ENST00000523950 CPXM1Q96SM3 734 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 FOXQ1Q9C009 403 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 SYNCQ9H7C4 482 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 POPDC2Q9HBU9 364 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 NUDT5Q9UKK9 219 aa13.13□□□□□ -0.31
VEGFA-225ENST00000523950 ARIH1Q9Y4X5 557 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-225ENST00000523950 SLC12A8A0AV02 714 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 FAM170BA6NMN3 283 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 CAPN9O14815 690 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 MDM4O15151 490 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 CBFA2T2O43439 604 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 GREM1O60565 184 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 HSF2BPO75031 334 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 LATS1O95835 1130 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 CYP17A1P05093 508 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 MMEP08473 750 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 IRF1P10914 325 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 TARSP26639 723 aaKnown RBP13.12□□□□□ -0.31
VEGFA-225ENST00000523950 GJA4P35212 333 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 PBX1P40424 430 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 EIF2DP41214 584 aaKnown RBP13.12□□□□□ -0.31
VEGFA-225ENST00000523950 RPS9P46781 194 aaKnown RBP13.12□□□□□ -0.31
VEGFA-225ENST00000523950 VCPP55072 806 aaKnown RBP13.12□□□□□ -0.31
VEGFA-225ENST00000523950 YWHAZP63104 245 aaKnown RBP13.12□□□□□ -0.31
VEGFA-225ENST00000523950 NOMO3P69849 1222 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 TRIP4Q15650 581 aaPredicted RBP13.12□□□□□ -0.31
VEGFA-225ENST00000523950 PTPN20Q4JDL3 420 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 DGKKQ5KSL6 1271 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 TAF3Q5VWG9 929 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 Q6ZNB5 142 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 BBS7Q8IWZ6 715 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 CLEC4CQ8WTT0 213 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 BAP1Q92560 729 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 EDEM1Q92611 657 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 CLDN23Q96B33 292 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 FAM149B1Q96BN6 582 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 SERPINB11Q96P15 392 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 TTYH3Q9C0H2 523 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 NUCKS1Q9H1E3 243 aaKnown RBP13.12□□□□□ -0.31
VEGFA-225ENST00000523950 LINC00597Q9H2U6 94 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 TMEM51Q9NW97 253 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 ZNF318Q5VUA4 2279 aa13.12□□□□□ -0.31
VEGFA-225ENST00000523950 A0A1W2PQJ5 194 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 OTOL1A6NHN0 477 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-225ENST00000523950 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-225ENST00000523950 TRDMT1O14717 391 aaKnown RBP13.11□□□□□ -0.31
VEGFA-225ENST00000523950 HOXC11O43248 304 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-225ENST00000523950 ERBB2P04626 1255 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 CYP1A1P04798 512 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-225ENST00000523950 NCAM1P13591 858 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 CHKAP35790 457 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 GABRB2P47870 512 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 SOX9P48436 509 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 HARS2P49590 506 aaKnown RBP13.11□□□□□ -0.31
VEGFA-225ENST00000523950 FMO1Q01740 532 aa13.11□□□□□ -0.31
VEGFA-225ENST00000523950 GAD2Q05329 585 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms