RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 CSH2P0DML3 217 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 PAFAH1B1P43034 410 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 SEL1L2Q5TEA6 688 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 SND1Q7KZF4 910 aaKnown RBP eCLIP9.75□□□□□ -0.853e-10■■■□□ 16.4
SDCBP-212ENST00000523483 SCD5Q86SK9 330 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 MON1AQ86VX9 555 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 ATXN3LQ9H3M9 355 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 ZNF576Q9H609 170 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 PNPLA8Q9NP80 782 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 CYLDQ9NQC7 956 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 TRPM5Q9NZQ8 1165 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 FNIP2Q9P278 1114 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 STK39Q9UEW8 545 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 COLQQ9Y215 455 aaPredicted RBP9.75□□□□□ -0.85
SDCBP-212ENST00000523483 A0A1W2PRU2 124 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 LILRB3O75022 631 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 MTA2O94776 668 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 ZRANB2O95218 330 aaKnown RBP eCLIP9.74□□□□□ -0.85
SDCBP-212ENST00000523483 MAP3K6O95382 1288 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 FYNP06241 537 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 PYGMP11217 842 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 RALAP11233 206 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 KRT10P13645 584 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 SLC1A1P43005 524 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 CDH6P55285 790 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 HDAC4P56524 1084 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 CYP4F8P98187 520 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 UBE3AQ05086 875 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 ZC3H12AQ5D1E8 599 aaKnown RBP9.74□□□□□ -0.85
SDCBP-212ENST00000523483 CCDC149Q6ZUS6 474 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 TAC4Q86UU9 113 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 HS6ST3Q8IZP7 471 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 DQX1Q8TE96 717 aaKnown RBP9.74□□□□□ -0.85
SDCBP-212ENST00000523483 ABCC13Q9NSE7 274 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 PIGVQ9NUD9 493 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 LZTS1Q9Y250 596 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 SPTBN5Q9NRC6 3674 aaKnown RBP9.74□□□□□ -0.85
SDCBP-212ENST00000523483 CCDC66A2RUB6 948 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 RIOK3O14730 519 aaKnown RBP9.74□□□□□ -0.85
SDCBP-212ENST00000523483 DAB1O75553 588 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 TUBB4AP04350 444 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 CKMP06732 381 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 TCP1P17987 556 aaKnown RBP9.74□□□□□ -0.85
SDCBP-212ENST00000523483 LONRF2Q1L5Z9 754 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 SLC25A52Q3SY17 297 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 SLFN11Q7Z7L1 901 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 TCEAL8Q8IYN2 117 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 CCDC33Q8N5R6 958 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 ARFGAP1Q8N6T3 406 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 CCDC185Q8N715 623 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 CASP10Q92851 521 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 SAMD11Q96NU1 681 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 CYP2S1Q96SQ9 504 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 RXFP1Q9HBX9 757 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 CALCOCO1Q9P1Z2 691 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 CDH22Q9UJ99 828 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 DOCK6Q96HP0 2047 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 SLC12A8A0AV02 714 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 MIF4GDA9UHW6 222 aaKnown RBP9.74□□□□□ -0.85
SDCBP-212ENST00000523483 CD48P09326 243 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 SRGAP2BP0DMP2 458 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 RARAP10276 462 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 NTHL1P78549 312 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 TXNDC8Q6A555 127 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 MAB21L3Q8N8X9 362 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 PPM1EQ8WY54 764 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 RAPGEF5Q92565 580 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 PEBP4Q96S96 227 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 WDCPQ9H6R7 721 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 CDC23Q9UJX2 597 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 SCML2Q9UQR0 700 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 USP3Q9Y6I4 520 aa9.74□□□□□ -0.85
SDCBP-212ENST00000523483 C5orf67F2Z3F1 127 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 CLCN4P51793 760 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 HADHBP55084 474 aaKnown RBP9.73□□□□□ -0.85
SDCBP-212ENST00000523483 PM20D1Q6GTS8 502 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 ITIH5Q86UX2 942 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 PYROXD2Q8N2H3 581 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 NETO2Q8NC67 525 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.73□□□□□ -0.85
SDCBP-212ENST00000523483 ING5Q8WYH8 240 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 BHMTQ93088 406 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 HES6Q96HZ4 224 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 GCNAQ96QF7 691 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 DDX23Q9BUQ8 820 aaKnown RBP9.73□□□□□ -0.85
SDCBP-212ENST00000523483 MARCH2Q9P0N8 246 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 SNX10Q9Y5X0 201 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 C2orf78A6NCI8 922 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 DAPK3O43293 454 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 CLASP2O75122 1294 aaKnown RBP9.73□□□□□ -0.85
SDCBP-212ENST00000523483 SP100P23497 879 aaPredicted RBP9.73□□□□□ -0.85
SDCBP-212ENST00000523483 CTNNA2P26232 953 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 RDXP35241 583 aaKnown RBP9.73□□□□□ -0.85
SDCBP-212ENST00000523483 CETN2P41208 172 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 DCAF12L1Q5VU92 463 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 KLHL7Q8IXQ5 586 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 FNIP1Q8TF40 1166 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 PPP2R3CQ969Q6 453 aa9.73□□□□□ -0.85
SDCBP-212ENST00000523483 SNRNP25Q9BV90 132 aaKnown RBP9.73□□□□□ -0.85
SDCBP-212ENST00000523483 UBXN6Q9BZV1 441 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms