RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 CACNA2D2Q9NY47 1150 aa16.27■□□□□ 0.2
MRPS28-209ENST00000522987 NAGPAQ9UK23 515 aa16.27■□□□□ 0.2
MRPS28-209ENST00000522987 LSM7Q9UK45 103 aaKnown RBP16.27■□□□□ 0.2
MRPS28-209ENST00000522987 CEP295Q9C0D2 2601 aa16.26■□□□□ 0.19
MRPS28-209ENST00000522987 WASH3PC4AMC7 463 aa16.26■□□□□ 0.19
MRPS28-209ENST00000522987 NDUFV2P19404 249 aa16.26■□□□□ 0.19
MRPS28-209ENST00000522987 NR2F2P24468 414 aa16.26■□□□□ 0.19
MRPS28-209ENST00000522987 NTSR1P30989 418 aa16.26■□□□□ 0.19
MRPS28-209ENST00000522987 SHC2P98077 582 aa16.26■□□□□ 0.19
MRPS28-209ENST00000522987 HTR3DQ70Z44 454 aa16.26■□□□□ 0.19
MRPS28-209ENST00000522987 UNC93AQ86WB7 457 aa16.26■□□□□ 0.19
MRPS28-209ENST00000522987 SYT12Q8IV01 421 aa16.26■□□□□ 0.19
MRPS28-209ENST00000522987 TAF4BQ92750 862 aa16.26■□□□□ 0.19
MRPS28-209ENST00000522987 P2RY11Q96G91 374 aa16.26■□□□□ 0.19
MRPS28-209ENST00000522987 SPATA32Q96LK8 384 aa16.26■□□□□ 0.19
MRPS28-209ENST00000522987 XPO6Q96QU8 1125 aaKnown RBP16.26■□□□□ 0.19
MRPS28-209ENST00000522987 RASAL2Q9UJF2 1139 aa16.26■□□□□ 0.19
MRPS28-209ENST00000522987 SCML2Q9UQR0 700 aa16.26■□□□□ 0.19
MRPS28-209ENST00000522987 SPAARA0A1B0GVQ0 90 aa16.25■□□□□ 0.19
MRPS28-209ENST00000522987 A0A1W2PQF6 199 aa16.25■□□□□ 0.19
MRPS28-209ENST00000522987 NDUFA8P51970 172 aa16.25■□□□□ 0.19
MRPS28-209ENST00000522987 PPP1R26Q5T8A7 1209 aaPredicted RBP16.25■□□□□ 0.19
MRPS28-209ENST00000522987 ATL3Q6DD88 541 aa16.25■□□□□ 0.19
MRPS28-209ENST00000522987 KIAA1324Q6UXG2 1013 aaKnown RBP16.25■□□□□ 0.19
MRPS28-209ENST00000522987 TRMT11Q7Z4G4 463 aaKnown RBP16.25■□□□□ 0.19
MRPS28-209ENST00000522987 SCD5Q86SK9 330 aa16.25■□□□□ 0.19
MRPS28-209ENST00000522987 FAM186BQ8IYM0 893 aa16.25■□□□□ 0.19
MRPS28-209ENST00000522987 SMYD4Q8IYR2 804 aaPredicted RBP16.25■□□□□ 0.19
MRPS28-209ENST00000522987 IPO4Q8TEX9 1081 aaKnown RBP16.25■□□□□ 0.19
MRPS28-209ENST00000522987 HNRNPABQ99729 332 aaKnown RBP16.25■□□□□ 0.19
MRPS28-209ENST00000522987 NT5C1AQ9BXI3 368 aa16.25■□□□□ 0.19
MRPS28-209ENST00000522987 IMPG2Q9BZV3 1241 aa16.25■□□□□ 0.19
MRPS28-209ENST00000522987 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.25■□□□□ 0.19
MRPS28-209ENST00000522987 NUMA1Q14980 2115 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 IGHV1OR15-9A0A0B4J2B8 117 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 AP5Z1O43299 807 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 CACNG3O60359 315 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 KRT13P13646 458 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 CMA1P23946 247 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 SYKP43405 635 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 DGKGP49619 791 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 GOLGA8FQ08AF8 430 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 GOLGA8DPQ0D2H9 430 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 INCA1Q0VD86 236 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 EFEMP1Q12805 493 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 BYSLQ13895 437 aaKnown RBP16.24■□□□□ 0.19
MRPS28-209ENST00000522987 SDE2Q6IQ49 451 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 NUDT18Q6ZVK8 323 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 CACUL1Q86Y37 369 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 SLC41A1Q8IVJ1 513 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 SEMA4DQ92854 862 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 HSPA12BQ96MM6 686 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 NIF3L1Q9GZT8 377 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 CYLDQ9NQC7 956 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 EVLQ9UI08 416 aaPredicted RBP16.24■□□□□ 0.19
MRPS28-209ENST00000522987 DNMT3LQ9UJW3 386 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 PILRBQ9UKJ0 227 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 HPSEQ9Y251 543 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 AKAP13Q12802 2813 aa16.24■□□□□ 0.19
MRPS28-209ENST00000522987 CKAP5Q14008 2032 aa16.23■□□□□ 0.19
MRPS28-209ENST00000522987 TMEM131Q92545 1883 aa16.23■□□□□ 0.19
MRPS28-209ENST00000522987 IKBKBO14920 756 aa16.23■□□□□ 0.19
MRPS28-209ENST00000522987 CILPO75339 1184 aa16.23■□□□□ 0.19
MRPS28-209ENST00000522987 STC2O76061 302 aa16.23■□□□□ 0.19
MRPS28-209ENST00000522987 KLKB1P03952 638 aa16.23■□□□□ 0.19
MRPS28-209ENST00000522987 TRIM21P19474 475 aaKnown RBP16.23■□□□□ 0.19
MRPS28-209ENST00000522987 MAOBP27338 520 aa16.23■□□□□ 0.19
MRPS28-209ENST00000522987 ATXN3P54252 364 aaPredicted RBP16.23■□□□□ 0.19
MRPS28-209ENST00000522987 ZNF33AQ06730 810 aa16.23■□□□□ 0.19
MRPS28-209ENST00000522987 LMAN2Q12907 356 aa16.23■□□□□ 0.19
MRPS28-209ENST00000522987 PREPLQ4J6C6 727 aaPredicted RBP16.23■□□□□ 0.19
MRPS28-209ENST00000522987 UNQ6494/PRO21346Q6UXR6 183 aa16.23■□□□□ 0.19
MRPS28-209ENST00000522987 NDRG1Q92597 394 aaKnown RBP16.23■□□□□ 0.19
MRPS28-209ENST00000522987 HEXIM2Q96MH2 286 aaKnown RBP16.23■□□□□ 0.19
MRPS28-209ENST00000522987 ARID3AQ99856 593 aa16.23■□□□□ 0.19
MRPS28-209ENST00000522987 SCNM1Q9BWG6 230 aa16.23■□□□□ 0.19
MRPS28-209ENST00000522987 GOLPH3LQ9H4A5 285 aa16.23■□□□□ 0.19
MRPS28-209ENST00000522987 WDR35Q9P2L0 1181 aa16.23■□□□□ 0.19
MRPS28-209ENST00000522987 TRAF3IP3Q9Y228 551 aa16.23■□□□□ 0.19
MRPS28-209ENST00000522987 ZDHHC9Q9Y397 364 aa16.23■□□□□ 0.19
MRPS28-209ENST00000522987 TP53BP1Q12888 1972 aaPredicted RBP16.22■□□□□ 0.19
MRPS28-209ENST00000522987 ZBTB24O43167 697 aaPredicted RBP16.22■□□□□ 0.19
MRPS28-209ENST00000522987 HYAL3O43820 417 aaPredicted RBP16.22■□□□□ 0.19
MRPS28-209ENST00000522987 PROS1P07225 676 aa16.22■□□□□ 0.19
MRPS28-209ENST00000522987 CISD3P0C7P0 127 aa16.22■□□□□ 0.19
MRPS28-209ENST00000522987 CEACAM1P13688 526 aa16.22■□□□□ 0.19
MRPS28-209ENST00000522987 CSRP1P21291 193 aaKnown RBP16.22■□□□□ 0.19
MRPS28-209ENST00000522987 PLA2G4AP47712 749 aa16.22■□□□□ 0.19
MRPS28-209ENST00000522987 KIF11P52732 1056 aa16.22■□□□□ 0.19
MRPS28-209ENST00000522987 DPYDQ12882 1025 aa16.22■□□□□ 0.19
MRPS28-209ENST00000522987 SLC23A3Q6PIS1 610 aa16.22■□□□□ 0.19
MRPS28-209ENST00000522987 Q6ZNB5 142 aa16.22■□□□□ 0.19
MRPS28-209ENST00000522987 INTS8Q75QN2 995 aaKnown RBP16.22■□□□□ 0.19
MRPS28-209ENST00000522987 RGL4Q8IZJ4 473 aa16.22■□□□□ 0.19
MRPS28-209ENST00000522987 TRIML1Q8N9V2 468 aa16.22■□□□□ 0.19
MRPS28-209ENST00000522987 CCDC47Q96A33 483 aaKnown RBP16.22■□□□□ 0.19
MRPS28-209ENST00000522987 DUSP16Q9BY84 665 aa16.22■□□□□ 0.19
MRPS28-209ENST00000522987 CYP3A43Q9HB55 503 aa16.22■□□□□ 0.19
MRPS28-209ENST00000522987 GDPD2Q9HCC8 539 aa16.22■□□□□ 0.19
MRPS28-209ENST00000522987 CD248Q9HCU0 757 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms