RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 CMTM8Q8IZV2 173 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 MAB21L3Q8N8X9 362 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 RPLP0P6Q8NHW5 317 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 GIPC2Q8TF65 315 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 ZCCHC14Q8WYQ9 949 aaKnown RBP6.71□□□□□ -1.34
PABPC1-220ENST00000522658 ALKBH8Q96BT7 664 aaKnown RBP6.71□□□□□ -1.34
PABPC1-220ENST00000522658 SENP8Q96LD8 212 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 TSPAN18Q96SJ8 248 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 P2RY13Q9BPV8 354 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 PYM1Q9BRP8 204 aaKnown RBP6.71□□□□□ -1.34
PABPC1-220ENST00000522658 MSTO1Q9BUK6 570 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 LSM14BQ9BX40 385 aaKnown RBP6.71□□□□□ -1.34
PABPC1-220ENST00000522658 NIF3L1Q9GZT8 377 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 SMOC1Q9H4F8 434 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 ZHX3Q9H4I2 956 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 EBF3Q9H4W6 596 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 GKN1Q9NS71 199 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 KCND2Q9NZV8 630 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 BCCIPQ9P287 314 aaKnown RBP eCLIP6.71□□□□□ -1.34
PABPC1-220ENST00000522658 HSFX1Q9UBD0 423 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 PCDHB5Q9Y5E4 795 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 NCANO14594 1321 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 CITO14578 2027 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 NUP210Q8TEM1 1887 aaPredicted RBP6.7□□□□□ -1.34
PABPC1-220ENST00000522658 GREB1Q4ZG55 1949 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 TRAV19A0A0A6YYK7 116 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 SHISA7A6NL88 538 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 EIF4E1BA6NMX2 242 aaKnown RBP6.7□□□□□ -1.34
PABPC1-220ENST00000522658 CYB561D2O14569 222 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 OGTO15294 1046 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 CLSTN1O94985 981 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 NFATC1O95644 943 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 EGFP01133 1207 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 FDPSP14324 419 aaKnown RBP6.7□□□□□ -1.34
PABPC1-220ENST00000522658 PROZP22891 400 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 GUCY2CP25092 1073 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 CD96P40200 585 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 RAP1GAPP47736 663 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 TAF6P49848 677 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 LMAN2Q12907 356 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 BYSLQ13895 437 aaKnown RBP6.7□□□□□ -1.34
PABPC1-220ENST00000522658 COL9A2Q14055 689 aaPredicted RBP6.7□□□□□ -1.34
PABPC1-220ENST00000522658 PDIA5Q14554 519 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 DMC1Q14565 340 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 MTF1Q14872 753 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 NFE2Q16621 373 aaPredicted RBP6.7□□□□□ -1.34
PABPC1-220ENST00000522658 SLC10A6Q3KNW5 377 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 PLK5Q496M5 336 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 TMEM196Q5HYL7 178 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 ZNF648Q5T619 568 aaPredicted RBP6.7□□□□□ -1.34
PABPC1-220ENST00000522658 TRIM68Q6AZZ1 485 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 CENPPQ6IPU0 288 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 TCEAL6Q6IPX3 200 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 RINT1Q6NUQ1 792 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 GAREM2Q75VX8 874 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 CCDC83Q8IWF9 413 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 HDDC3Q8N4P3 179 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 EPS8L3Q8TE67 593 aaKnown RBP6.7□□□□□ -1.34
PABPC1-220ENST00000522658 CD101Q93033 1021 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 TCEAL3Q969E4 200 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 RSPRY1Q96DX4 576 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 CALML4Q96GE6 196 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 ZBTB45Q96K62 511 aaPredicted RBP6.7□□□□□ -1.34
PABPC1-220ENST00000522658 DUSP23Q9BVJ7 150 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 PTPRHQ9HD43 1115 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 TDP1Q9NUW8 608 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 DUS2Q9NX74 493 aaKnown RBP6.7□□□□□ -1.34
PABPC1-220ENST00000522658 ACACBO00763 2458 aa6.7□□□□□ -1.34
PABPC1-220ENST00000522658 TPRP12270 2363 aaKnown RBP6.69□□□□□ -1.34
PABPC1-220ENST00000522658 NOTCH4Q99466 2003 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 LACTBL1A8MY62 500 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 TRDMT1O14717 391 aaKnown RBP6.69□□□□□ -1.34
PABPC1-220ENST00000522658 GADD45BO75293 160 aaPredicted RBP6.69□□□□□ -1.34
PABPC1-220ENST00000522658 PRPF40AO75400 957 aaKnown RBP6.69□□□□□ -1.34
PABPC1-220ENST00000522658 LARGE1O95461 756 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 USP17L7P0C7H9 530 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 C1QTNF9P0C862 333 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 CEACAM1P13688 526 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 ARSAP15289 507 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 ANXA13P27216 316 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 PNPLA4P41247 253 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 TNFSF9P41273 254 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 AARSP49588 968 aaKnown RBP eCLIP6.69□□□□□ -1.34
PABPC1-220ENST00000522658 GUCY2FP51841 1108 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 LILRA4P59901 499 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 RPL10AP62906 217 aaKnown RBP6.69□□□□□ -1.34
PABPC1-220ENST00000522658 MYL7Q01449 175 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 FAM160A1Q05DH4 1040 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 IFI16Q16666 785 aaKnown RBP6.69□□□□□ -1.34
PABPC1-220ENST00000522658 JADE1Q6IE81 842 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 ANO7Q6IWH7 933 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 FSTL4Q6MZW2 842 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 KIAA1211LQ6NV74 962 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 FAM214BQ7L5A3 538 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 LPCAT2Q7L5N7 544 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 SYT13Q7L8C5 426 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 RABEPKQ7Z6M1 372 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 SPATA2LQ8IUW3 424 aaPredicted RBP6.69□□□□□ -1.34
PABPC1-220ENST00000522658 MYCT1Q8N699 235 aa6.69□□□□□ -1.34
PABPC1-220ENST00000522658 TTC9BQ8N6N2 239 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms