RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 TRIM17Q9Y577 477 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 TRPV2Q9Y5S1 764 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 POMT1Q9Y6A1 747 aa4.3□□□□□ -1.72
SKP1-209ENST00000522552 PNMA6EA0A0J9YXQ4 647 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 GNAT3A8MTJ3 354 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 KIF28PB7ZC32 967 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 SCAMP1O15126 338 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 DHHO43323 396 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 TAF5LO75529 589 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 TPOP07202 933 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 CCDC175P0C221 793 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 SAT1P21673 171 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 TACR1P25103 407 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 HOXA11P31270 313 aaPredicted RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 PRPHP41219 470 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 MTHFRP42898 656 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 GPC3P51654 580 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 CORO7P57737 925 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 STARD6P59095 220 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 MRPS5P82675 430 aaKnown RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 KIAA2012Q0VF49 1180 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 MRPL28Q13084 256 aaKnown RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 IFT88Q13099 833 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 EIF2B5Q13144 721 aaKnown RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 CBX3Q13185 183 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 ATP1A4Q13733 1029 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 ADGRE1Q14246 886 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 MORF4L2Q15014 288 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 NTRK2Q16620 822 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 C9orf152Q5JTZ5 239 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 CDKAL1Q5VV42 579 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 OLFML2BQ68BL8 750 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 KRT80Q6KB66 452 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 KLHL35Q6PF15 583 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 NCEH1Q6PIU2 408 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 DNAAF5Q86Y56 855 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 DPP10Q8N608 796 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 FAM71DQ8N9W8 422 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 POC5Q8NA72 575 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 OR5AN1Q8NGI8 311 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 FBXO30Q8TB52 745 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 ZNF480Q8WV37 535 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 WDR60Q8WVS4 1066 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 HMGB4Q8WW32 186 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 SYAP1Q96A49 352 aaPredicted RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 CHFRQ96EP1 664 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 RAB3IPQ96QF0 476 aaPredicted RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 NTPCRQ9BSD7 190 aaKnown RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 KRTAP4-5Q9BYR2 181 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 TAOK3Q9H2K8 898 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 UNKLQ9H9P5 680 aaKnown RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 RXFP1Q9HBX9 757 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 TMEM140Q9NV12 185 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 ZSCAN32Q9NX65 697 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 PPP1R14DQ9NXH3 145 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 PALD1Q9ULE6 856 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 SMC3Q9UQE7 1217 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 RUVBL1Q9Y265 456 aaKnown RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 GDAQ9Y2T3 454 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 ACTL7AQ9Y615 435 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 AP1M2Q9Y6Q5 423 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 TRAV34A0A0B4J273 112 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 hCG_1809904A0A1W2PP81 198 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 A0A1W2PPE2 198 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 A0A1W2PR64 198 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 FRMD3A2A2Y4 597 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 RGSL1A5PLK6 1076 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 GLOD5A6NK44 160 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 K7EPI3 171 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 WNT10BO00744 389 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 N4BP3O15049 544 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 GRM6O15303 877 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 SART1O43290 800 aaKnown RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 PSMD10O75832 226 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 KIF20AO95235 890 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 OLFM2O95897 454 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 GJB1P08034 283 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 SNRPA1P09661 255 aaKnown RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 PTAFRP25105 342 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 BMPR1AP36894 532 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 PTDSS1P48651 473 aaKnown RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 LMAN1P49257 510 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 CDK7P50613 346 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 POLGP54098 1239 aaPredicted RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 ANTXR2P58335 489 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 SLC26A5P58743 744 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 TBL3Q12788 808 aaKnown RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 NFATC3Q12968 1075 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 SMAD4Q13485 552 aaKnown RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 SHROOM1Q2M3G4 852 aaPredicted RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 KBTBD12Q3ZCT8 623 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 LRRC24Q50LG9 513 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 CBWD5Q5RIA9 395 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 ATXN7L2Q5T6C5 722 aaPredicted RBP4.29□□□□□ -1.72
SKP1-209ENST00000522552 CD276Q5ZPR3 534 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 GRAMD4Q6IC98 578 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 TTI2Q6NXR4 508 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 MED25Q71SY5 747 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 CHST9Q7L1S5 443 aa4.29□□□□□ -1.72
SKP1-209ENST00000522552 CHST3Q7LGC8 479 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms