RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 DNAJC17Q9NVM6 304 aaKnown RBP21.76■■□□□ 1.07
SDCBP-209ENST00000522243 TSPAN16Q9UKR8 245 aa21.76■■□□□ 1.07
SDCBP-209ENST00000522243 CTNND2Q9UQB3 1225 aa21.76■■□□□ 1.07
SDCBP-209ENST00000522243 DCHS1Q96JQ0 3298 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 ADAM23O75077 832 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 STC2O76061 302 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 TYRP14679 529 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 TKTL1P51854 596 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 STX17P56962 302 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 PDE4CQ08493 712 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 ELF2Q15723 593 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 AASDHQ4L235 1098 aaPredicted RBP21.75■■□□□ 1.07
SDCBP-209ENST00000522243 USP39Q53GS9 565 aaKnown RBP21.75■■□□□ 1.07
SDCBP-209ENST00000522243 SGO2Q562F6 1265 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 EOGTQ5NDL2 527 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 GRAMD4Q6IC98 578 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 TTI2Q6NXR4 508 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 TADA2BQ86TJ2 420 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 TERB1Q8NA31 727 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 C12orf50Q8NA57 414 aaPredicted RBP21.75■■□□□ 1.07
SDCBP-209ENST00000522243 UBA3Q8TBC4 463 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 CEP63Q96MT8 703 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 UBXN6Q9BZV1 441 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 PLK2Q9NYY3 685 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 CLIC5Q9NZA1 410 aa21.75■■□□□ 1.07
SDCBP-209ENST00000522243 CIZ1Q9ULV3 898 aaPredicted RBP21.75■■□□□ 1.07
SDCBP-209ENST00000522243 MYO18AQ92614 2054 aaKnown RBP21.75■■□□□ 1.07
SDCBP-209ENST00000522243 THADAQ6YHU6 1953 aa21.74■■□□□ 1.07
SDCBP-209ENST00000522243 RHOBTB1O94844 696 aa21.74■■□□□ 1.07
SDCBP-209ENST00000522243 ZNF806P0C7X5 589 aa21.74■■□□□ 1.07
SDCBP-209ENST00000522243 BCKDHBP21953 392 aa21.74■■□□□ 1.07
SDCBP-209ENST00000522243 MPLP40238 635 aa21.74■■□□□ 1.07
SDCBP-209ENST00000522243 PPP1R2P41236 205 aa21.74■■□□□ 1.07
SDCBP-209ENST00000522243 WASP42768 502 aa21.74■■□□□ 1.07
SDCBP-209ENST00000522243 SLC8A3P57103 927 aa21.74■■□□□ 1.07
SDCBP-209ENST00000522243 YWHAEP62258 255 aaKnown RBP21.74■■□□□ 1.07
SDCBP-209ENST00000522243 HSF5Q4G112 596 aaPredicted RBP21.74■■□□□ 1.07
SDCBP-209ENST00000522243 RAB41Q5JT25 222 aa21.74■■□□□ 1.07
SDCBP-209ENST00000522243 Q6ZNB5 142 aa21.74■■□□□ 1.07
SDCBP-209ENST00000522243 UBR7Q8N806 425 aa21.74■■□□□ 1.07
SDCBP-209ENST00000522243 ZNF513Q8N8E2 541 aaPredicted RBP21.74■■□□□ 1.07
SDCBP-209ENST00000522243 RLN3Q8WXF3 142 aa21.74■■□□□ 1.07
SDCBP-209ENST00000522243 XPO6Q96QU8 1125 aaKnown RBP21.74■■□□□ 1.07
SDCBP-209ENST00000522243 ULBP1Q9BZM6 244 aa21.74■■□□□ 1.07
SDCBP-209ENST00000522243 FAM124BQ9H5Z6 455 aaPredicted RBP21.74■■□□□ 1.07
SDCBP-209ENST00000522243 POLMQ9NP87 494 aaPredicted RBP21.74■■□□□ 1.07
SDCBP-209ENST00000522243 RXFP3Q9NSD7 469 aa21.74■■□□□ 1.07
SDCBP-209ENST00000522243 HCN2Q9UL51 889 aa21.74■■□□□ 1.07
SDCBP-209ENST00000522243 SLC30A4O14863 429 aa21.73■■□□□ 1.07
SDCBP-209ENST00000522243 ALDH1A2O94788 518 aa21.73■■□□□ 1.07
SDCBP-209ENST00000522243 KLKB1P03952 638 aa21.73■■□□□ 1.07
SDCBP-209ENST00000522243 BCAT1P54687 386 aa21.73■■□□□ 1.07
SDCBP-209ENST00000522243 YWHAGP61981 247 aaKnown RBP eCLIP21.73■■□□□ 1.07
SDCBP-209ENST00000522243 CREB5Q02930 508 aa21.73■■□□□ 1.07
SDCBP-209ENST00000522243 MORC3Q14149 939 aa21.73■■□□□ 1.07
SDCBP-209ENST00000522243 PREPLQ4J6C6 727 aaPredicted RBP21.73■■□□□ 1.07
SDCBP-209ENST00000522243 TOGARAM2Q6ZUX3 1019 aa21.73■■□□□ 1.07
SDCBP-209ENST00000522243 NUDT18Q6ZVK8 323 aa21.73■■□□□ 1.07
SDCBP-209ENST00000522243 ZNF276Q8N554 614 aa21.73■■□□□ 1.07
SDCBP-209ENST00000522243 KAT5Q92993 513 aa21.73■■□□□ 1.07
SDCBP-209ENST00000522243 NT5C1BQ96P26 610 aa21.73■■□□□ 1.07
SDCBP-209ENST00000522243 LRRC4Q9HBW1 653 aa21.73■■□□□ 1.07
SDCBP-209ENST00000522243 MARK1Q9P0L2 795 aa21.73■■□□□ 1.07
SDCBP-209ENST00000522243 BCCIPQ9P287 314 aaKnown RBP eCLIP21.73■■□□□ 1.07
SDCBP-209ENST00000522243 WDR35Q9P2L0 1181 aa21.73■■□□□ 1.07
SDCBP-209ENST00000522243 HESX1Q9UBX0 185 aa21.73■■□□□ 1.07
SDCBP-209ENST00000522243 PCDHGA5Q9Y5G8 931 aa21.73■■□□□ 1.07
SDCBP-209ENST00000522243 DMXL1Q9Y485 3027 aa21.73■■□□□ 1.07
SDCBP-209ENST00000522243 ABCA7Q8IZY2 2146 aa21.73■■□□□ 1.07
SDCBP-209ENST00000522243 CEP250Q9BV73 2442 aa21.72■■□□□ 1.07
SDCBP-209ENST00000522243 FRYLO94915 3013 aa21.72■■□□□ 1.07
SDCBP-209ENST00000522243 TCRBV21S2A2A0A5A6 115 aa21.72■■□□□ 1.07
SDCBP-209ENST00000522243 XPO1O14980 1071 aaKnown RBP21.72■■□□□ 1.07
SDCBP-209ENST00000522243 CACNG3O60359 315 aa21.72■■□□□ 1.07
SDCBP-209ENST00000522243 VDRP11473 427 aa21.72■■□□□ 1.07
SDCBP-209ENST00000522243 TBXAS1P24557 533 aaPredicted RBP21.72■■□□□ 1.07
SDCBP-209ENST00000522243 PLA2G2CQ5R387 149 aa21.72■■□□□ 1.07
SDCBP-209ENST00000522243 EGFLAMQ63HQ2 1017 aa21.72■■□□□ 1.07
SDCBP-209ENST00000522243 TMEM270Q6UE05 265 aa21.72■■□□□ 1.07
SDCBP-209ENST00000522243 RSRC2Q7L4I2 434 aaKnown RBP21.72■■□□□ 1.07
SDCBP-209ENST00000522243 PGBD3Q8N328 593 aa21.72■■□□□ 1.07
SDCBP-209ENST00000522243 ARHGAP18Q8N392 663 aa21.72■■□□□ 1.07
SDCBP-209ENST00000522243 FRMD1Q8N878 549 aa21.72■■□□□ 1.07
SDCBP-209ENST00000522243 HMGB4Q8WW32 186 aa21.72■■□□□ 1.07
SDCBP-209ENST00000522243 ERLEC1Q96DZ1 483 aa21.72■■□□□ 1.07
SDCBP-209ENST00000522243 P2RY11Q96G91 374 aa21.72■■□□□ 1.07
SDCBP-209ENST00000522243 CDK5RAP1Q96SZ6 601 aaKnown RBP21.72■■□□□ 1.07
SDCBP-209ENST00000522243 PCDHB4Q9Y5E5 795 aa21.72■■□□□ 1.07
SDCBP-209ENST00000522243 SLC12A8A0AV02 714 aa21.71■■□□□ 1.07
SDCBP-209ENST00000522243 BICDL2A1A5D9 508 aa21.71■■□□□ 1.07
SDCBP-209ENST00000522243 PRRT4C9JH25 899 aa21.71■■□□□ 1.07
SDCBP-209ENST00000522243 ZBED1O96006 694 aa21.71■■□□□ 1.07
SDCBP-209ENST00000522243 COG7P83436 770 aa21.71■■□□□ 1.07
SDCBP-209ENST00000522243 ADIGQ0VDE8 80 aa21.71■■□□□ 1.07
SDCBP-209ENST00000522243 BST2Q10589 180 aaKnown RBP21.71■■□□□ 1.07
SDCBP-209ENST00000522243 PMS2CLQ68D20 193 aa21.71■■□□□ 1.07
SDCBP-209ENST00000522243 TCEAL6Q6IPX3 200 aa21.71■■□□□ 1.07
SDCBP-209ENST00000522243 PPM1KQ8N3J5 372 aa21.71■■□□□ 1.07
SDCBP-209ENST00000522243 TFAP2BQ92481 460 aa21.71■■□□□ 1.07
SDCBP-209ENST00000522243 TCEAL3Q969E4 200 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms