RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-215	ENST00000522115	CCDC150	Q8NCX0	1101 aa		5.01	□□□□□ -1.61
PTPN12-215	ENST00000522115	MAFA	Q8NHW3	353 aa	Predicted RBP	5.01	□□□□□ -1.61
PTPN12-215	ENST00000522115	CCDC17	Q96LX7	622 aa		5.01	□□□□□ -1.61
PTPN12-215	ENST00000522115	RIPOR3	Q96MK2	946 aa		5.01	□□□□□ -1.61
PTPN12-215	ENST00000522115	NUDT22	Q9BRQ3	303 aa		5.01	□□□□□ -1.61
PTPN12-215	ENST00000522115	ZNF700	Q9H0M5	742 aa		5.01	□□□□□ -1.61
PTPN12-215	ENST00000522115	CA14	Q9ULX7	337 aa		5.01	□□□□□ -1.61
PTPN12-215	ENST00000522115	SPATA31A1	Q5TZJ5	1347 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	CYP2D7	A0A087X1C5	515 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	DNAJC9-AS1	A6NH13	148 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	TMEM232	C9JQI7	657 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	HNRNPDL	O14979	420 aa	Known RBP	5	□□□□□ -1.61
PTPN12-215	ENST00000522115	GCAT	O75600	419 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	PRR35	P0CG20	571 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	TXNL4A	P83876	142 aa	Known RBP	5	□□□□□ -1.61
PTPN12-215	ENST00000522115	MAPKAPK3	Q16644	382 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	SLC35G1	Q2M3R5	365 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	5	□□□□□ -1.61
PTPN12-215	ENST00000522115	CEP78	Q5JTW2	689 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	DGKK	Q5KSL6	1271 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	MORN5	Q5VZ52	161 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	GRHL2	Q6ISB3	625 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	VSTM1	Q6UX27	236 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	CLASRP	Q8N2M8	674 aa	Known RBP	5	□□□□□ -1.61
PTPN12-215	ENST00000522115	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	5	□□□□□ -1.61
PTPN12-215	ENST00000522115	DDB2	Q92466	427 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	HIC2	Q96JB3	615 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	CCDC138	Q96M89	665 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	C5orf34	Q96MH7	638 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	CINP	Q9BW66	212 aa	Predicted RBP	5	□□□□□ -1.61
PTPN12-215	ENST00000522115	NECTIN3	Q9NQS3	549 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	RGL1	Q9NZL6	768 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	ASAP1	Q9ULH1	1129 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	MAFF	Q9ULX9	164 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	MAN2B2	Q9Y2E5	1009 aa		5	□□□□□ -1.61
PTPN12-215	ENST00000522115	DHH	O43323	396 aa		4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	NCK2	O43639	380 aa		4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	HARS	P12081	509 aa	Known RBP	4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	KEL	P23276	732 aa		4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	KCNB1	Q14721	858 aa		4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	DAZAP2	Q15038	168 aa	Predicted RBP	4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	MEX3C	Q5U5Q3	659 aa	Known RBP	4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	FAM90A2P	Q658T7	463 aa		4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	RAP1GAP2	Q684P5	730 aa		4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	TMEM65	Q6PI78	240 aa		4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	SVIP	Q8NHG7	77 aa		4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	DEPTOR	Q8TB45	409 aa		4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	OVCA2	Q8WZ82	227 aa		4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	MYD88	Q99836	296 aa		4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	RNF26	Q9BY78	433 aa	Predicted RBP	4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	PRSS22	Q9GZN4	317 aa		4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	PCDHAC1	Q9H158	963 aa		4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	VPS45	Q9NRW7	570 aa		4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	TM7SF3	Q9NS93	570 aa		4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	GJB4	Q9NTQ9	266 aa		4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	ZNF70	Q9UC06	446 aa	Predicted RBP	4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	BTBD3	Q9Y2F9	522 aa		4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	KAT6A	Q92794	2004 aa		4.99	□□□□□ -1.61
PTPN12-215	ENST00000522115	WDR17	Q8IZU2	1322 aa		4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	BCAR3	O75815	825 aa		4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	NDST3	O95803	873 aa		4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	MBP	P02686	304 aa	Predicted RBP	4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	MYL3	P08590	195 aa		4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	CYP2D6	P10635	497 aa		4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	EEF1G	P26641	437 aa	Known RBP	4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	ABCG1	P45844	678 aa		4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	CCDC15	Q0P6D6	951 aa		4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	IL31	Q6EBC2	164 aa		4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	SLC18B1	Q6NT16	456 aa		4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	YTHDF3	Q7Z739	585 aa	Known RBP	4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	TXLNB	Q8N3L3	684 aa		4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	GLIS1	Q8NBF1	620 aa		4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	GJA10	Q969M2	543 aa		4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	P2RY11	Q96G91	374 aa		4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	SGCZ	Q96LD1	299 aa		4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	FAM118B	Q9BPY3	351 aa		4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	SCAF8	Q9UPN6	1271 aa	Known RBP	4.98	□□□□□ -1.61
PTPN12-215	ENST00000522115	FAM234B	A2RU67	622 aa		4.97	□□□□□ -1.61
PTPN12-215	ENST00000522115	CLIC1	O00299	241 aa		4.97	□□□□□ -1.61
PTPN12-215	ENST00000522115	PLA2G6	O60733	806 aa		4.97	□□□□□ -1.61
PTPN12-215	ENST00000522115	PRAMEF2	O60811	474 aa		4.97	□□□□□ -1.61
PTPN12-215	ENST00000522115	VIP	P01282	170 aa		4.97	□□□□□ -1.61
PTPN12-215	ENST00000522115	MATN1	P21941	496 aa		4.97	□□□□□ -1.61
PTPN12-215	ENST00000522115	PBX1	P40424	430 aa		4.97	□□□□□ -1.61
PTPN12-215	ENST00000522115	HSPA7	P48741	367 aa		4.97	□□□□□ -1.61
PTPN12-215	ENST00000522115	BTK	Q06187	659 aa		4.97	□□□□□ -1.61
PTPN12-215	ENST00000522115	MFSD13A	Q14CX5	517 aa		4.97	□□□□□ -1.61
PTPN12-215	ENST00000522115	MPEG1	Q2M385	716 aa		4.97	□□□□□ -1.61
PTPN12-215	ENST00000522115	SUPT20HL1	Q3ZLR7	823 aa		4.97	□□□□□ -1.61
PTPN12-215	ENST00000522115	MAP9	Q49MG5	647 aa		4.97	□□□□□ -1.61
PTPN12-215	ENST00000522115	MTX3	Q5HYI7	312 aa		4.97	□□□□□ -1.61
PTPN12-215	ENST00000522115	ZNF626	Q68DY1	528 aa		4.97	□□□□□ -1.61
PTPN12-215	ENST00000522115	RANBP10	Q6VN20	620 aa		4.97	□□□□□ -1.61
PTPN12-215	ENST00000522115	FAM71D	Q8N9W8	422 aa		4.97	□□□□□ -1.61

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