RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 TRUB2O95900 331 aaKnown RBP22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 C1RP00736 705 aa22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 RALAP11233 206 aa22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 RARGP13631 454 aa22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 IL1R2P27930 398 aa22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 RDXP35241 583 aaKnown RBP22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 SLC25A11Q02978 314 aaKnown RBP22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 TUBB2AQ13885 445 aa22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 ATP13A4Q4VNC1 1196 aa22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 OTUD1Q5VV17 481 aaPredicted RBP22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 TXNRD3NBQ6F5E7 133 aa22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 DQX1Q8TE96 717 aaKnown RBP22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 OVCA2Q8WZ82 227 aa22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 TRMT2BQ96GJ1 504 aaKnown RBP22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 PBKQ96KB5 322 aa22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 CAPZA3Q96KX2 299 aa22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 TUBB2BQ9BVA1 445 aa22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 DDIT4Q9NX09 232 aa22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 CLIC5Q9NZA1 410 aa22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 CDC23Q9UJX2 597 aa22.29■■□□□ 1.16
R3HCC1-208ENST00000522012 CCL16O15467 120 aa22.28■■□□□ 1.16
R3HCC1-208ENST00000522012 CEP104O60308 925 aa22.28■■□□□ 1.16
R3HCC1-208ENST00000522012 ENDOD1O94919 500 aa22.28■■□□□ 1.16
R3HCC1-208ENST00000522012 KRT7P08729 469 aa22.28■■□□□ 1.16
R3HCC1-208ENST00000522012 NRIP1P48552 1158 aa22.28■■□□□ 1.16
R3HCC1-208ENST00000522012 ZNF211Q13398 564 aaPredicted RBP22.28■■□□□ 1.16
R3HCC1-208ENST00000522012 SMTNL2Q2TAL5 461 aa22.28■■□□□ 1.16
R3HCC1-208ENST00000522012 KCNT1Q5JUK3 1230 aa22.28■■□□□ 1.16
R3HCC1-208ENST00000522012 TAC4Q86UU9 113 aa22.28■■□□□ 1.16
R3HCC1-208ENST00000522012 ACSF2Q96CM8 615 aaPredicted RBP22.28■■□□□ 1.16
R3HCC1-208ENST00000522012 TRPM5Q9NZQ8 1165 aa22.28■■□□□ 1.16
R3HCC1-208ENST00000522012 UXTQ9UBK9 157 aaPredicted RBP22.28■■□□□ 1.16
R3HCC1-208ENST00000522012 MRFAP1Q9Y605 127 aa22.28■■□□□ 1.16
R3HCC1-208ENST00000522012 ZMYND10O75800 440 aa22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 ZDHHC11BP0C7U3 371 aa22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 GBP1P32455 592 aa22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 ODF2Q5BJF6 829 aa22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 DCAF12L1Q5VU92 463 aa22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 RTL10Q7L3V2 364 aa22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 BNIPLQ7Z465 357 aa22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 POLNQ7Z5Q5 900 aa22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 FAM131BQ86XD5 332 aa22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 HSPH1Q92598 858 aa22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 MRPL38Q96DV4 380 aaKnown RBP22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 PEBP4Q96S96 227 aa22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 ZNF576Q9H609 170 aa22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 ZNF334Q9HCZ1 680 aaPredicted RBP22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 PIGVQ9NUD9 493 aa22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 KLHL11Q9NVR0 708 aa22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 DDX56Q9NY93 547 aaKnown RBP22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 SFMBT1Q9UHJ3 866 aa22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 DPP7Q9UHL4 492 aa22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 PATJQ8NI35 1801 aa22.27■■□□□ 1.16
R3HCC1-208ENST00000522012 ZNF840PA6NDX5 716 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 SPDYE4A6NLX3 237 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 RFPL2O75678 378 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 F9P00740 461 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 KRT1P04264 644 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 PYGMP11217 842 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 C10orf120Q5SQS8 335 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 SND1Q7KZF4 910 aaKnown RBP eCLIP22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 KATNAL2Q8IYT4 538 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 CASP10Q92851 521 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 PGAP3Q96FM1 320 aaPredicted RBP22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 MS4A14Q96JA4 679 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 CARD9Q9H257 536 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 HCFC2Q9Y5Z7 792 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 CES2O00748 559 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 ZRANB2O95218 330 aaKnown RBP eCLIP22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 RARAP10276 462 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 EFEMP1Q12805 493 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 DUSP6Q16828 381 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 BOLA3Q53S33 107 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 CCDC181Q5TID7 509 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 AADACL2Q6P093 401 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 ELMSAN1Q6PJG2 1045 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 HDAC7Q8WUI4 952 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 RNF34Q969K3 372 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 SMOC2Q9H3U7 446 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 CCSER2Q9H7U1 834 aa22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 OLA1Q9NTK5 396 aaKnown RBP22.26■■□□□ 1.15
R3HCC1-208ENST00000522012 PI4K2BG5E9Z4 385 aa22.25■■□□□ 1.15
R3HCC1-208ENST00000522012 SOX1O00570 391 aaPredicted RBP22.25■■□□□ 1.15
R3HCC1-208ENST00000522012 TLR5O60602 858 aa22.25■■□□□ 1.15
R3HCC1-208ENST00000522012 TBX18O95935 607 aa22.25■■□□□ 1.15
R3HCC1-208ENST00000522012 PPP3CCP48454 512 aa22.25■■□□□ 1.15
R3HCC1-208ENST00000522012 WHAMMP3Q1A5X7 153 aa22.25■■□□□ 1.15
R3HCC1-208ENST00000522012 SEL1L2Q5TEA6 688 aa22.25■■□□□ 1.15
R3HCC1-208ENST00000522012 SNX30Q5VWJ9 437 aa22.25■■□□□ 1.15
R3HCC1-208ENST00000522012 MSANTD2Q6P1R3 559 aa22.25■■□□□ 1.15
R3HCC1-208ENST00000522012 CREG2Q8IUH2 290 aa22.25■■□□□ 1.15
R3HCC1-208ENST00000522012 CCDC50Q8IVM0 306 aa22.25■■□□□ 1.15
R3HCC1-208ENST00000522012 RCOR2Q8IZ40 523 aa22.25■■□□□ 1.15
R3HCC1-208ENST00000522012 HS6ST3Q8IZP7 471 aa22.25■■□□□ 1.15
R3HCC1-208ENST00000522012 EXD1Q8NHP7 514 aa22.25■■□□□ 1.15
R3HCC1-208ENST00000522012 RNF25Q96BH1 459 aaPredicted RBP22.25■■□□□ 1.15
R3HCC1-208ENST00000522012 CORO1BQ9BR76 489 aa22.25■■□□□ 1.15
R3HCC1-208ENST00000522012 L2HGDHQ9H9P8 463 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms