RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 DCLK1O15075 740 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 AKAP10O43572 662 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 DLDP09622 509 aaKnown RBP3.87□□□□□ -1.79
VPS13B-209ENST00000521559 MYL6BP14649 208 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 HTR1BP28222 390 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 ABCG1P45844 678 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 PDE1AP54750 535 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 LILRA4P59901 499 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 RAB1AP62820 205 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 SRSF7Q16629 238 aaKnown RBP eCLIP3.87□□□□□ -1.79
VPS13B-209ENST00000521559 PROSER3Q2NL68 480 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 ALDH1L2Q3SY69 923 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 MGAT5BQ3V5L5 792 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 PCID2Q5JVF3 399 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 TREML2Q5T2D2 321 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 LMBRD2Q68DH5 695 aaPredicted RBP3.87□□□□□ -1.79
VPS13B-209ENST00000521559 ZNF783Q6ZMS7 281 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 KIF6Q6ZMV9 814 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 COPS6Q7L5N1 327 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 LRRC71Q8N4P6 559 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 OR6B3Q8NGW1 331 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 PLBD2Q8NHP8 589 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 KBTBD7Q8WVZ9 684 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 SMG7Q92540 1137 aaKnown RBP3.87□□□□□ -1.79
VPS13B-209ENST00000521559 ANKS1AQ92625 1134 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 SLC29A3Q9BZD2 475 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 SERHLQ9NQF3 203 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 TRMT13Q9NUP7 481 aaKnown RBP3.87□□□□□ -1.79
VPS13B-209ENST00000521559 KLHL42Q9P2K6 505 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 NARFQ9UHQ1 456 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 SERTAD3Q9UJW9 196 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 TOGARAM1Q9Y4F4 1720 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 TBC1D4O60343 1298 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 UBXN7O94888 489 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 CAMTA2O94983 1202 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 DDX58O95786 925 aaKnown RBP3.86□□□□□ -1.79
VPS13B-209ENST00000521559 PDHA1P08559 390 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 IL6RP08887 468 aaPredicted RBP3.86□□□□□ -1.79
VPS13B-209ENST00000521559 NPSP0C0P6 89 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 GYS1P13807 737 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 JUPP14923 745 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 CERS1P27544 350 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 TM4SF1P30408 202 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 CYP2C18P33260 490 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 SLC11A2P49281 568 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 RAB27AP51159 221 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 PDE6CP51160 858 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 RARSP54136 660 aaKnown RBP3.86□□□□□ -1.79
VPS13B-209ENST00000521559 KRT17Q04695 432 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 AIMP1Q12904 312 aaKnown RBP3.86□□□□□ -1.79
VPS13B-209ENST00000521559 ZNF267Q14586 743 aaPredicted RBP3.86□□□□□ -1.79
VPS13B-209ENST00000521559 SLC44A4Q53GD3 710 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 RGS7BPQ6MZT1 257 aaPredicted RBP3.86□□□□□ -1.79
VPS13B-209ENST00000521559 CLEC4GQ6UXB4 293 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 KSR2Q6VAB6 950 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 G2E3Q7L622 706 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 SLC15A3Q8IY34 581 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 SLC35G2Q8TBE7 412 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 JDP2Q8WYK2 163 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 ATG4AQ8WYN0 398 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 SUCLG2Q96I99 432 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 MRGPRX1Q96LB2 322 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 CDH19Q9H159 772 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 SH3BP4Q9P0V3 963 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 SRP68Q9UHB9 627 aaKnown RBP3.86□□□□□ -1.79
VPS13B-209ENST00000521559 NDRG4Q9ULP0 352 aaKnown RBP3.86□□□□□ -1.79
VPS13B-209ENST00000521559 SSX2IPQ9Y2D8 614 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 MAP3K15Q6ZN16 1313 aa3.86□□□□□ -1.79
VPS13B-209ENST00000521559 USP42Q9H9J4 1324 aaKnown RBP3.86□□□□□ -1.79
VPS13B-209ENST00000521559 DOT1LQ8TEK3 1739 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 A1L4Q6 167 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 DNAJC9-AS1A6NH13 148 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 H0YIZ8 118 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 IPO8O15397 1037 aaKnown RBP3.85□□□□□ -1.79
VPS13B-209ENST00000521559 PHGDHO43175 533 aaKnown RBP3.85□□□□□ -1.79
VPS13B-209ENST00000521559 BCAR3O75815 825 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 PRKCBP05771 671 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 CELA2AP08217 269 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 PCSK6P29122 969 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 LIPAP38571 399 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 UCP3P55916 312 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 TPTEP56180 551 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 HOXA4Q00056 320 aaPredicted RBP3.85□□□□□ -1.79
VPS13B-209ENST00000521559 RAB32Q13637 225 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 HLFQ16534 295 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 ANO6Q4KMQ2 910 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 HSP90AB3PQ58FF7 597 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 CXorf57Q6NSI4 855 aaKnown RBP3.85□□□□□ -1.79
VPS13B-209ENST00000521559 MAVSQ7Z434 540 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 DNAJC5GQ8N7S2 189 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 ABHD11Q8NFV4 315 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 OSCP1Q8WVF1 389 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 ARHGAP45Q92619 1136 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 LRGUKQ96M69 825 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 ISCA1Q9BUE6 129 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 DPCDQ9BVM2 203 aaPredicted RBP3.85□□□□□ -1.79
VPS13B-209ENST00000521559 DUSP22Q9NRW4 184 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 SMC4Q9NTJ3 1288 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 DLL3Q9NYJ7 618 aa3.85□□□□□ -1.79
VPS13B-209ENST00000521559 ZIM2Q9NZV7 527 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms