RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 PCSK6P29122 969 aa7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 ADRA1BP35368 520 aa7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 PBX1P40424 430 aa7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 GRIA3P42263 894 aa7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 HMGA2P52926 109 aa7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 PNLIPRP1P54315 467 aa7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 ARL4CP56559 192 aa7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 SUMO2P61956 95 aaKnown RBP7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 AP2B1P63010 937 aa7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 CSHL1Q14406 222 aa7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 TIGD6Q17RP2 521 aa7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 ATPAF1Q5TC12 328 aaPredicted RBP7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 DPY19L3Q6ZPD9 716 aa7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 RFX8Q6ZV50 586 aa7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 PARS2Q7L3T8 475 aaKnown RBP7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 WDR53Q7Z5U6 358 aaPredicted RBP7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 PEG10Q86TG7 708 aaKnown RBP7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 ULK2Q8IYT8 1036 aa7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 WDYHV1Q96HA8 205 aa7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 PRR25Q96S07 402 aa7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 MRIQ9BWK5 157 aa7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 PABPC3Q9H361 631 aaKnown RBP7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 MLXIPQ9HAP2 919 aa7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 PRDM8Q9NQV8 689 aa7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 ING1Q9UK53 422 aaPredicted RBP7.59□□□□□ -1.19
NUDCD1-204ENST00000521439 GRID2IPA4D2P6 1211 aa7.58□□□□□ -1.2
NUDCD1-204ENST00000521439 NPHP1O15259 732 aa7.58□□□□□ -1.2
NUDCD1-204ENST00000521439 SPRY2O43597 315 aa7.58□□□□□ -1.2
NUDCD1-204ENST00000521439 TJP3O95049 919 aa7.58□□□□□ -1.2
NUDCD1-204ENST00000521439 CREB1P16220 341 aa7.58□□□□□ -1.2
NUDCD1-204ENST00000521439 CTGFP29279 349 aa7.58□□□□□ -1.2
NUDCD1-204ENST00000521439 FOXI1Q12951 378 aa7.58□□□□□ -1.2
NUDCD1-204ENST00000521439 TMEM196Q5HYL7 178 aa7.58□□□□□ -1.2
NUDCD1-204ENST00000521439 Q6ZWC4 215 aa7.58□□□□□ -1.2
NUDCD1-204ENST00000521439 SLC44A2Q8IWA5 706 aaPredicted RBP7.58□□□□□ -1.2
NUDCD1-204ENST00000521439 SIRT6Q8N6T7 355 aa7.58□□□□□ -1.2
NUDCD1-204ENST00000521439 ACTRT2Q8TDY3 377 aa7.58□□□□□ -1.2
NUDCD1-204ENST00000521439 NEU4Q8WWR8 484 aaPredicted RBP7.58□□□□□ -1.2
NUDCD1-204ENST00000521439 VPS50Q96JG6 964 aa7.58□□□□□ -1.2
NUDCD1-204ENST00000521439 ITM2CQ9NQX7 267 aa7.58□□□□□ -1.2
NUDCD1-204ENST00000521439 SRP68Q9UHB9 627 aaKnown RBP7.58□□□□□ -1.2
NUDCD1-204ENST00000521439 AP4M1O00189 453 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 IRAK2O43187 625 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 TTLL1O95922 423 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 JUPP14923 745 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 AKT1P31749 480 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 CYP2C18P33260 490 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 DGKQP52824 942 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 E2F1Q01094 437 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 TAF5Q15542 800 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 TBC1D25Q3MII6 688 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 TRIM60Q495X7 471 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 MTHFD1LQ6UB35 978 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 CLASRPQ8N2M8 674 aaKnown RBP7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 BEND2Q8NDZ0 799 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 SCAMP5Q8TAC9 235 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 SLC9A6Q92581 669 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 LARP4BQ92615 738 aaKnown RBP7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 RUBCNQ92622 972 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 GCC1Q96CN9 775 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 FAM167BQ9BTA0 163 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 DDX23Q9BUQ8 820 aaKnown RBP7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 DUSP22Q9NRW4 184 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 DLL3Q9NYJ7 618 aa7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.57□□□□□ -1.2
NUDCD1-204ENST00000521439 SALL3Q9BXA9 1300 aa7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 ORC4O43929 436 aa7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 NDUFB7P17568 137 aa7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 DRD1P21728 446 aa7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 CST5P28325 142 aaPredicted RBP7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 GSTM5P46439 218 aa7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 KCNJ12Q14500 433 aa7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 P3H1Q32P28 736 aa7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 AASDHQ4L235 1098 aaPredicted RBP7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 FAM90A2PQ658T7 463 aa7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 MSANTD2Q6P1R3 559 aa7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 ANKRD16Q6P6B7 361 aa7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 PIK3AP1Q6ZUJ8 805 aa7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 PTCHD4Q6ZW05 846 aa7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 ANKRD18AQ8IVF6 992 aa7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 SUGP1Q8IWZ8 645 aaKnown RBP7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 NGDNQ8NEJ9 315 aaKnown RBP7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 OVCA2Q8WZ82 227 aa7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 SAYSD1Q9NPB0 183 aa7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 RXFP3Q9NSD7 469 aa7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 AMFRQ9UKV5 643 aa7.56□□□□□ -1.2
NUDCD1-204ENST00000521439 WRNQ14191 1432 aaPredicted RBP eCLIP7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 HMX3A6NHT5 357 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 LINC00473A8K010 186 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 CES2O00748 559 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 FAM155BO75949 473 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 ENGP17813 658 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 MCM5P33992 734 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 TGFB2P61812 414 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 BTBD16Q32M84 506 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 GRHL2Q6ISB3 625 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 CCDC144NLQ6NUI1 221 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 NFRKBQ6P4R8 1299 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 RAB11FIP2Q7L804 512 aa7.55□□□□□ -1.2
NUDCD1-204ENST00000521439 ZNF627Q7L945 461 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms