RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 ZDHHC4Q9NPG8 344 aa16.65■□□□□ 0.26
CLN8-205ENST00000520991 VPS45Q9NRW7 570 aa16.65■□□□□ 0.26
CLN8-205ENST00000520991 WDR35Q9P2L0 1181 aa16.65■□□□□ 0.26
CLN8-205ENST00000520991 CIZ1Q9ULV3 898 aaPredicted RBP16.65■□□□□ 0.26
CLN8-205ENST00000520991 USP3Q9Y6I4 520 aa16.65■□□□□ 0.26
CLN8-205ENST00000520991 SDK1Q7Z5N4 2213 aa16.64■□□□□ 0.25
CLN8-205ENST00000520991 GREM1O60565 184 aa16.64■□□□□ 0.25
CLN8-205ENST00000520991 TYRP14679 529 aa16.64■□□□□ 0.25
CLN8-205ENST00000520991 CUL2Q13617 745 aa16.64■□□□□ 0.25
CLN8-205ENST00000520991 ARHGAP17Q68EM7 881 aa16.64■□□□□ 0.25
CLN8-205ENST00000520991 IL31Q6EBC2 164 aa16.64■□□□□ 0.25
CLN8-205ENST00000520991 SCD5Q86SK9 330 aa16.64■□□□□ 0.25
CLN8-205ENST00000520991 ARHGAP18Q8N392 663 aa16.64■□□□□ 0.25
CLN8-205ENST00000520991 ZNF513Q8N8E2 541 aaPredicted RBP16.64■□□□□ 0.25
CLN8-205ENST00000520991 ANKRD52Q8NB46 1076 aa16.64■□□□□ 0.25
CLN8-205ENST00000520991 KCNV2Q8TDN2 545 aa16.64■□□□□ 0.25
CLN8-205ENST00000520991 HMGB4Q8WW32 186 aa16.64■□□□□ 0.25
CLN8-205ENST00000520991 SPACA7Q96KW9 195 aa16.64■□□□□ 0.25
CLN8-205ENST00000520991 METTL14Q9HCE5 456 aaKnown RBP16.64■□□□□ 0.25
CLN8-205ENST00000520991 CLIC5Q9NZA1 410 aa16.64■□□□□ 0.25
CLN8-205ENST00000520991 RASAL2Q9UJF2 1139 aa16.64■□□□□ 0.25
CLN8-205ENST00000520991 COQ4Q9Y3A0 265 aa16.64■□□□□ 0.25
CLN8-205ENST00000520991 CACNG3O60359 315 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 ADAM23O75077 832 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 CHRM1P11229 460 aaPredicted RBP16.63■□□□□ 0.25
CLN8-205ENST00000520991 HNRNPLP14866 589 aaKnown RBP eCLIP16.63■□□□□ 0.25
CLN8-205ENST00000520991 CD19P15391 556 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 PPP1R2P41236 205 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 EFEMP1Q12805 493 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 LRMPQ12912 555 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 GOLGA7BQ2TAP0 167 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 CCDC40Q4G0X9 1142 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 SGO2Q562F6 1265 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 PLA2G2CQ5R387 149 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 RSRC2Q7L4I2 434 aaKnown RBP16.63■□□□□ 0.25
CLN8-205ENST00000520991 PIGZQ86VD9 579 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 PGBD3Q8N328 593 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 ZNF276Q8N554 614 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 BHMTQ93088 406 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 SLC35C1Q96A29 364 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 DHTKD1Q96HY7 919 aaPredicted RBP16.63■□□□□ 0.25
CLN8-205ENST00000520991 UBXN6Q9BZV1 441 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 HESX1Q9UBX0 185 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 MAN1B1Q9UKM7 699 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 LAMA1P25391 3075 aa16.63■□□□□ 0.25
CLN8-205ENST00000520991 TCRBV21S2A2A0A5A6 115 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 TRIM24O15164 1050 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 STC2O76061 302 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 CAVIN2O95810 425 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 HMBSP08397 361 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 BCKDHBP21953 392 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 KCNA4P22459 653 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 TBXAS1P24557 533 aaPredicted RBP16.62■□□□□ 0.25
CLN8-205ENST00000520991 TKTL1P51854 596 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 LIMK1P53667 647 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 BCAT1P54687 386 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 COG7P83436 770 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 PMS2CLQ68D20 193 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 KLHL10Q6JEL2 608 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 Q6ZNB5 142 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 ELOA2Q8IYF1 753 aaPredicted RBP16.62■□□□□ 0.25
CLN8-205ENST00000520991 DDX1Q92499 740 aaKnown RBP16.62■□□□□ 0.25
CLN8-205ENST00000520991 CEP63Q96MT8 703 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 MARK1Q9P0L2 795 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 TSPAN16Q9UKR8 245 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 STRIP2Q9ULQ0 834 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 ZNF510Q9Y2H8 683 aa16.62■□□□□ 0.25
CLN8-205ENST00000520991 BCLAF3A2AJT9 711 aaKnown RBP16.61■□□□□ 0.25
CLN8-205ENST00000520991 MAP3K13O43283 966 aa16.61■□□□□ 0.25
CLN8-205ENST00000520991 HOXB2P14652 356 aa16.61■□□□□ 0.25
CLN8-205ENST00000520991 FMO5P49326 533 aa16.61■□□□□ 0.25
CLN8-205ENST00000520991 DHPSP49366 369 aaPredicted RBP16.61■□□□□ 0.25
CLN8-205ENST00000520991 YWHAGP61981 247 aaKnown RBP eCLIP16.61■□□□□ 0.25
CLN8-205ENST00000520991 PPM1JQ5JR12 505 aa16.61■□□□□ 0.25
CLN8-205ENST00000520991 RAB41Q5JT25 222 aa16.61■□□□□ 0.25
CLN8-205ENST00000520991 TCEAL6Q6IPX3 200 aa16.61■□□□□ 0.25
CLN8-205ENST00000520991 SDE2Q6IQ49 451 aa16.61■□□□□ 0.25
CLN8-205ENST00000520991 CYP2U1Q7Z449 544 aa16.61■□□□□ 0.25
CLN8-205ENST00000520991 RLN3Q8WXF3 142 aa16.61■□□□□ 0.25
CLN8-205ENST00000520991 TCEAL3Q969E4 200 aa16.61■□□□□ 0.25
CLN8-205ENST00000520991 DCLK3Q9C098 648 aa16.61■□□□□ 0.25
CLN8-205ENST00000520991 RXFP3Q9NSD7 469 aa16.61■□□□□ 0.25
CLN8-205ENST00000520991 MARCH2Q9P0N8 246 aa16.61■□□□□ 0.25
CLN8-205ENST00000520991 NCOR2Q9Y618 2525 aa16.6■□□□□ 0.25
CLN8-205ENST00000520991 XPO1O14980 1071 aaKnown RBP16.6■□□□□ 0.25
CLN8-205ENST00000520991 ZBTB24O43167 697 aaPredicted RBP16.6■□□□□ 0.25
CLN8-205ENST00000520991 ZBED1O96006 694 aa16.6■□□□□ 0.25
CLN8-205ENST00000520991 CD44P16070 742 aaKnown RBP16.6■□□□□ 0.25
CLN8-205ENST00000520991 NTSR1P30989 418 aa16.6■□□□□ 0.25
CLN8-205ENST00000520991 CORO1AP31146 461 aaKnown RBP16.6■□□□□ 0.25
CLN8-205ENST00000520991 WASP42768 502 aa16.6■□□□□ 0.25
CLN8-205ENST00000520991 DGKGP49619 791 aa16.6■□□□□ 0.25
CLN8-205ENST00000520991 PDE4CQ08493 712 aa16.6■□□□□ 0.25
CLN8-205ENST00000520991 BST2Q10589 180 aaKnown RBP16.6■□□□□ 0.25
CLN8-205ENST00000520991 CETN1Q12798 172 aa16.6■□□□□ 0.25
CLN8-205ENST00000520991 BYSLQ13895 437 aaKnown RBP16.6■□□□□ 0.25
CLN8-205ENST00000520991 STPG1Q5TH74 334 aa16.6■□□□□ 0.25
CLN8-205ENST00000520991 EGFLAMQ63HQ2 1017 aa16.6■□□□□ 0.25
CLN8-205ENST00000520991 CHPFQ8IZ52 775 aa16.6■□□□□ 0.25
CLN8-205ENST00000520991 OLIG1Q8TAK6 271 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms