RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 FAM227BQ96M60 508 aa6.74□□□□□ -1.33
PABPC1-216ENST00000520868 FAM193BQ96PV7 902 aaPredicted RBP6.74□□□□□ -1.33
PABPC1-216ENST00000520868 TAAR1Q96RJ0 339 aa6.74□□□□□ -1.33
PABPC1-216ENST00000520868 LRFN3Q9BTN0 628 aa6.74□□□□□ -1.33
PABPC1-216ENST00000520868 UBA5Q9GZZ9 404 aa6.74□□□□□ -1.33
PABPC1-216ENST00000520868 SLC2A4RGQ9NR83 387 aa6.74□□□□□ -1.33
PABPC1-216ENST00000520868 HELLSQ9NRZ9 838 aa6.74□□□□□ -1.33
PABPC1-216ENST00000520868 TCP11L1Q9NUJ3 509 aa6.74□□□□□ -1.33
PABPC1-216ENST00000520868 DPP7Q9UHL4 492 aa6.74□□□□□ -1.33
PABPC1-216ENST00000520868 MTUS1Q9ULD2 1270 aa6.74□□□□□ -1.33
PABPC1-216ENST00000520868 COG5Q9UP83 839 aa6.74□□□□□ -1.33
PABPC1-216ENST00000520868 REV3LO60673 3130 aa6.74□□□□□ -1.33
PABPC1-216ENST00000520868 B4DLN1 442 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 B5MCH6 92 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 LPXNO60711 386 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 FAM20BO75063 409 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 GH1P01241 217 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 MMP3P08254 477 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 CRHR1P34998 444 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 MRPL12P52815 198 aaKnown RBP6.73□□□□□ -1.33
PABPC1-216ENST00000520868 WDR5P61964 334 aaKnown RBP6.73□□□□□ -1.33
PABPC1-216ENST00000520868 DEFB103AP81534 67 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 TMPRSS15P98073 1019 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 ZNF543Q08ER8 600 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 GPNMBQ14956 572 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 LY6KQ17RY6 165 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 TCTN1Q2MV58 587 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 MCMDC2Q4G0Z9 681 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 MFSD6Q6ZSS7 791 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 AFAP1L1Q8TED9 768 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 AUTS2Q8WXX7 1259 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 KAT2BQ92831 832 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 TTC14Q96N46 770 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 PRRX2Q99811 253 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 LSM14BQ9BX40 385 aaKnown RBP6.73□□□□□ -1.33
PABPC1-216ENST00000520868 NRDE2Q9H7Z3 1164 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 VAT1LQ9HCJ6 419 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 PNMA2Q9UL42 364 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 SORCS3Q9UPU3 1222 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 GBF1Q92538 1859 aa6.73□□□□□ -1.33
PABPC1-216ENST00000520868 A0A0D9SFI3 127 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 DHX16O60231 1041 aaKnown RBP6.72□□□□□ -1.33
PABPC1-216ENST00000520868 ITGA10O75578 1167 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 BAIAP3O94812 1187 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 HSPD1P10809 573 aaKnown RBP6.72□□□□□ -1.33
PABPC1-216ENST00000520868 CASTP20810 708 aaKnown RBP6.72□□□□□ -1.33
PABPC1-216ENST00000520868 INHBCP55103 352 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 ARHGAP1Q07960 439 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 CDC37Q16543 378 aaPredicted RBP6.72□□□□□ -1.33
PABPC1-216ENST00000520868 TMEM31Q5JXX7 168 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 LRRC8DQ7L1W4 858 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 ZNF589Q86UQ0 364 aaPredicted RBP6.72□□□□□ -1.33
PABPC1-216ENST00000520868 CAGE1Q8TC20 777 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 GDPD5Q8WTR4 605 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 LMBR1Q8WVP7 490 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 LENG9Q96B70 501 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 CTAGE1Q96RT6 745 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 MENTQ9BUN1 341 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 CPEB1Q9BZB8 566 aaKnown RBP6.72□□□□□ -1.33
PABPC1-216ENST00000520868 SLITRK6Q9H5Y7 841 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 COL20A1Q9P218 1284 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 HDAC6Q9UBN7 1215 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 EIF2B4Q9UI10 523 aaKnown RBP6.72□□□□□ -1.33
PABPC1-216ENST00000520868 EDARQ9UNE0 448 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 SCN5AQ14524 2016 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 WDR19Q8NEZ3 1342 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 SALL3Q9BXA9 1300 aa6.72□□□□□ -1.33
PABPC1-216ENST00000520868 LRRC37A2A6NM11 1700 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 LINC01553A4QN01 128 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 NBNO60934 754 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 SCAF4O95104 1147 aaKnown RBP6.71□□□□□ -1.34
PABPC1-216ENST00000520868 GJB5O95377 273 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 EYA4O95677 639 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 SNHG28P0DPA3 235 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 CKBP12277 381 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 MGAT1P26572 445 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 PDE1AP54750 535 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 CDK17Q00537 523 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 STXBP2Q15833 593 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 KIAA0753Q2KHM9 967 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 GPATCH4Q5T3I0 446 aaKnown RBP6.71□□□□□ -1.34
PABPC1-216ENST00000520868 ARHGEF16Q5VV41 709 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 DRICH1Q6PGQ1 229 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-216ENST00000520868 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.71□□□□□ -1.34
PABPC1-216ENST00000520868 ZNF627Q7L945 461 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 TBC1D10CQ8IV04 446 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 ADGRF4Q8IZF3 695 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 CPT1CQ8TCG5 803 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 NSUN6Q8TEA1 469 aaKnown RBP6.71□□□□□ -1.34
PABPC1-216ENST00000520868 LARP4BQ92615 738 aaKnown RBP6.71□□□□□ -1.34
PABPC1-216ENST00000520868 FATE1Q969F0 183 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 RILPL2Q969X0 211 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 TGS1Q96RS0 853 aaKnown RBP6.71□□□□□ -1.34
PABPC1-216ENST00000520868 DCLRE1CQ96SD1 692 aaKnown RBP6.71□□□□□ -1.34
PABPC1-216ENST00000520868 RMDN3Q96TC7 470 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 RAD9AQ99638 391 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 NDC1Q9BTX1 674 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 GPRC5BQ9NZH0 403 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 TRANK1O15050 2925 aa6.71□□□□□ -1.34
PABPC1-216ENST00000520868 TET1Q8NFU7 2136 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms