RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 GGT7Q9UJ14 662 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 GTF3C4Q9UKN8 822 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 SUPT20HL2P0C7V6 817 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 KDSRQ06136 332 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 SEC23AQ15436 765 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 PCSK7Q16549 785 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 STK32AQ8WU08 396 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 GRIN3BO60391 1043 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 NDUFS3O75489 264 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 SNRPAP09012 282 aaKnown RBP12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 ODC1P11926 461 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 TRIM65Q6PJ69 517 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 SLC25A41Q8N5S1 370 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 FAM71DQ8N9W8 422 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 TFB1MQ8WVM0 346 aaKnown RBP12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 PABPC5Q96DU9 382 aaKnown RBP12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 ADAM33Q9BZ11 813 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 BCL2L14Q9BZR8 327 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 UBQLN1Q9UMX0 589 aaKnown RBP12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 PCDHB7Q9Y5E2 793 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 PLEKP08567 350 aaPredicted RBP12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 ALOX5P09917 674 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 RRM2P31350 389 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 ATP12AP54707 1039 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 GEMIN4P57678 1058 aaKnown RBP12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 MMRN1Q13201 1228 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 SLC15A2Q16348 729 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 EFL1Q7Z2Z2 1120 aaKnown RBP12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 VN1R5Q7Z5H4 357 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 IFNLR1Q8IU57 520 aaPredicted RBP12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 DPP10Q8N608 796 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 NUDT12Q9BQG2 462 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 CTNNAL1Q9UBT7 734 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 MTO1Q9Y2Z2 717 aaKnown RBP12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 NEURL4Q96JN8 1562 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 SALL1Q9NSC2 1324 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 MAP2P11137 1827 aaKnown RBP12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 TCRBV5S4A2TA0A5A2 114 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 PRR23AA6NEV1 266 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 EVPLLA8MZ36 301 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 CYP2C8P10632 490 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 FOSL1P15407 271 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 CALB2P22676 271 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 GTF2A2P52657 109 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 IRAK1BP1Q5VVH5 260 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 GLB1LQ6UWU2 654 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 MARK2Q7KZI7 788 aaKnown RBP12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 ADGRA1Q86SQ6 560 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 LRRC49Q8IUZ0 686 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 CD302Q8IX05 232 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 C19orf18Q8NEA5 215 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 SEMA6BQ9H3T3 888 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 TFR2Q9UP52 801 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 MTSS1O43312 755 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 FDFT1P37268 417 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 ITGA9Q13797 1035 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 KLHL12Q53G59 568 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 IZUMO2Q6UXV1 221 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 KRT73Q86Y46 540 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 SLC13A5Q86YT5 568 aaPredicted RBP12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 EME1Q96AY2 570 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 CGRRF1Q99675 332 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 GOLPH3Q9H4A6 298 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 ING3Q9NXR8 418 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 CD274Q9NZQ7 290 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 FAM153AQ9UHL3 310 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 GPC6Q9Y625 555 aaPredicted RBP12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 DCCP43146 1447 aa12.46□□□□□ -0.41
ERGIC1-208ENST00000520399 STX7O15400 261 aaKnown RBP12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 ZC3H11AO75152 810 aaKnown RBP eCLIP12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 ARP10275 920 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 GYS1P13807 737 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 CCT8P50990 548 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 SREBF2Q12772 1141 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 MGAT5BQ3V5L5 792 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 KRT74Q7RTS7 529 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 NT5DC4Q86YG4 428 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 DENND6AQ8IWF6 608 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 CASKIN2Q8WXE0 1202 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 TMA16Q96EY4 203 aaKnown RBP12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 SERHL2Q9H4I8 314 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 AGO4Q9HCK5 861 aaKnown RBP12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 SERHLQ9NQF3 203 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 ZNF446Q9NWS9 450 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 IRF6O14896 467 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 NCAM1P13591 858 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 GTF2E2P29084 291 aaKnown RBP12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 TALDO1P37837 337 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 SLC34A1Q06495 639 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 KYNUQ16719 465 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 RUNDC3AQ59EK9 446 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 MPZL3Q6UWV2 235 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 ACER1Q8TDN7 264 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 PRMT6Q96LA8 375 aaPredicted RBP12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 SMAD5Q99717 465 aaKnown RBP12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 ZNF304Q9HCX3 659 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 PXMP2Q9NR77 195 aa12.46□□□□□ -0.42
ERGIC1-208ENST00000520399 TNS2Q63HR2 1409 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms