RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 CTHRC1Q96CG8 243 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 GRAMD1AQ96CP6 724 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 WDR24Q96S15 920 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 RIOX1Q9H6W3 641 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 AS3MTQ9HBK9 375 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 CPNE5Q9HCH3 593 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 RXFP3Q9NSD7 469 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 TFCP2L1Q9NZI6 479 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 MGAT4CQ9UBM8 478 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 DTNAQ9Y4J8 743 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 CEP162Q5TB80 1403 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 FER1L4A9Z1Z3 1794 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 F5H423 210 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 ZSCAN9O15535 394 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 SPRY2O43597 315 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 SKAP2O75563 359 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 WDR47O94967 919 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 NTSR2O95665 410 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 NUDT3O95989 172 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 HNRNPCP07910 306 aaKnown RBP eCLIP3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 PECAM1P16284 738 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 ADRA1DP25100 572 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 HTR7P34969 479 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 ICA1Q05084 483 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 C4orf46Q504U0 113 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 TMTC4Q5T4D3 741 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 SYCE2Q6PIF2 218 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 DPY19L3Q6ZPD9 716 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 PRIMA1Q86XR5 153 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 RASGRP3Q8IV61 690 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 OVCA2Q8WZ82 227 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 DAZAP1Q96EP5 407 aaKnown RBP3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 WDYHV1Q96HA8 205 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 LENG8Q96PV6 779 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 CRB3Q9BUF7 120 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 KLK15Q9H2R5 256 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 IL17RBQ9NRM6 502 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 ARPP21Q9UBL0 812 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 WNT6Q9Y6F9 365 aa3.84□□□□□ -1.79
HMGB1P41-201ENST00000520234 NCAPD3P42695 1498 aa3.84□□□□□ -1.8
HMGB1P41-201ENST00000520234 TARM1B6A8C7 271 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 H7C1Q1 480 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 ZNF213O14771 459 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 CBFA2T3O75081 653 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 SRGAP2BP0DMP2 458 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 NPPBP16860 134 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 MMP8P22894 467 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 CLK3P49761 638 aaKnown RBP3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 DIO1P49895 249 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 POLE2P56282 527 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 HOXA4Q00056 320 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 MTAPQ13126 283 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 FHL3Q13643 280 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 PTK2BQ14289 1009 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 SPARCL1Q14515 664 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 PUM3Q15397 648 aaKnown RBP3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 ZACNQ401N2 412 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 ARHGAP15Q53QZ3 475 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 COLEC12Q5KU26 742 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 LCE1AQ5T7P2 110 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 SUMO4Q6EEV6 95 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 TRIM72Q6ZMU5 477 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 SKAP1Q86WV1 359 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 GATAD2AQ86YP4 633 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 PNPLA1Q8N8W4 532 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 TERB1Q8NA31 727 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 FAM98AQ8NCA5 519 aaKnown RBP3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 VPS37AQ8NEZ2 397 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 FAM71BQ8TC56 605 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 NTN5Q8WTR8 489 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 POF1BQ8WVV4 589 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 C18orf8Q96DM3 657 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 SNX18Q96RF0 628 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 CINPQ9BW66 212 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 KRTAP1-5Q9BYS1 174 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 ASB6Q9NWX5 421 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 GAR1Q9NY12 217 aaKnown RBP3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 IGSF9Q9P2J2 1179 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 FANCIQ9NVI1 1328 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 GOLGA3Q08378 1498 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 BAZ1BQ9UIG0 1483 aaKnown RBP3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 CEP164Q9UPV0 1460 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 UNC13AQ9UPW8 1703 aa3.83□□□□□ -1.8
HMGB1P41-201ENST00000520234 ABCC8Q09428 1581 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 RUSC2Q8N2Y8 1516 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 NPC1O15118 1278 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 IGLV2-14P01704 120 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 ZNF37AP17032 561 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 KRTAP5-9P26371 169 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 MCM5P33992 734 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 ALDH18A1P54886 795 aaKnown RBP3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 CYP4F2P78329 520 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 TXNL4AP83876 142 aaKnown RBP3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 PSG6Q00889 435 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 LMAN2Q12907 356 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 DNASE1L3Q13609 305 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 BLMHQ13867 455 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 CSHL1Q14406 222 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms