RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 TBC1D10BQ4KMP7 808 aaPredicted RBP5.3□□□□□ -1.56
SDC2-204ENST00000519914 SPDYAQ5MJ70 313 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 ZBTB41Q5SVQ8 909 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 UBAP2Q5T6F2 1119 aaKnown RBP5.3□□□□□ -1.56
SDC2-204ENST00000519914 SPOPLQ6IQ16 392 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 TMEM270Q6UE05 265 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 TSHZ1Q6ZSZ6 1077 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 PRRT2Q7Z6L0 340 aaPredicted RBP5.3□□□□□ -1.56
SDC2-204ENST00000519914 VSIG1Q86XK7 387 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 CCDC13Q8IYE1 715 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 TMEM35BQ8NCS4 154 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 SLC35B2Q8TB61 432 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 MDM1Q8TC05 714 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 EPS8L3Q8TE67 593 aaKnown RBP5.3□□□□□ -1.56
SDC2-204ENST00000519914 CPA5Q8WXQ8 436 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 MAML1Q92585 1016 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 GATA6Q92908 595 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 ARHGEF2Q92974 986 aaKnown RBP5.3□□□□□ -1.56
SDC2-204ENST00000519914 TMEM143Q96AN5 459 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 GRAMD1AQ96CP6 724 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 ZBTB45Q96K62 511 aaPredicted RBP5.3□□□□□ -1.56
SDC2-204ENST00000519914 CABS1Q96KC9 395 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 FGD4Q96M96 766 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 SH3GL3Q99963 347 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 C11orf70Q9BRQ4 267 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 BCO2Q9BYV7 579 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 IMPG2Q9BZV3 1241 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 NRSN2Q9GZP1 204 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 MTFR1LQ9H019 292 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 XYLT2Q9H1B5 865 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 CLEC4MQ9H2X3 399 aaPredicted RBP5.3□□□□□ -1.56
SDC2-204ENST00000519914 CENPHQ9H3R5 247 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 SEMA6CQ9H3T2 930 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 PCDH9Q9HC56 1237 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 SSU72Q9NP77 194 aaKnown RBP5.3□□□□□ -1.56
SDC2-204ENST00000519914 GPRC5DQ9NZD1 345 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 SENP1Q9P0U3 644 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 WDR35Q9P2L0 1181 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 PRKAG3Q9UGI9 489 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 ASIC3Q9UHC3 531 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 ANAPC5Q9UJX4 755 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 STRIP2Q9ULQ0 834 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 SHOC2Q9UQ13 582 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 TNFSF13BQ9Y275 285 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 CAPN7Q9Y6W3 813 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 MCM3APO60318 1980 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 CCDC189A1A4V9 331 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 CFAP73A6NFT4 308 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 LRRIQ4A6NIV6 560 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 SIGLEC16A6NMB1 481 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 ZNF487B1APH4 448 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 ANKRD65E5RJM6 399 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 DNM1LO00429 736 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 CXCL11O14625 94 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 DYNC1LI2O43237 492 aaPredicted RBP5.29□□□□□ -1.56
SDC2-204ENST00000519914 MGRN1O60291 552 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 ENDOD1O94919 500 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 IL18RAPO95256 599 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 GJB6O95452 261 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 CST3P01034 146 aaPredicted RBP5.29□□□□□ -1.56
SDC2-204ENST00000519914 PRKCBP05771 671 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 NPR3P17342 541 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 GCAP28676 217 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 POLR2BP30876 1174 aaKnown RBP5.29□□□□□ -1.56
SDC2-204ENST00000519914 ATICP31939 592 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 SKIV2L2P42285 1042 aaKnown RBP5.29□□□□□ -1.56
SDC2-204ENST00000519914 CDKN2BP42772 138 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 CNTN2Q02246 1040 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 SLC25A11Q02978 314 aaKnown RBP5.29□□□□□ -1.56
SDC2-204ENST00000519914 MTA1Q13330 715 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 RIPK1Q13546 671 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 ZNF268Q14587 947 aaPredicted RBP5.29□□□□□ -1.56
SDC2-204ENST00000519914 TFDP3Q5H9I0 405 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 CELF3Q5SZQ8 465 aaKnown RBP5.29□□□□□ -1.56
SDC2-204ENST00000519914 TMEM63BQ5T3F8 832 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 RNASEH2BQ5TBB1 312 aaKnown RBP5.29□□□□□ -1.56
SDC2-204ENST00000519914 ANGEL2Q5VTE6 544 aaKnown RBP5.29□□□□□ -1.56
SDC2-204ENST00000519914 IZUMO3Q5VZ72 239 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 AP1ARQ63HQ0 302 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 LMBRD2Q68DH5 695 aaPredicted RBP5.29□□□□□ -1.56
SDC2-204ENST00000519914 CCDC62Q6P9F0 684 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 MPZL3Q6UWV2 235 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 MFSD7Q6UXD7 560 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 PPP1R21Q6ZMI0 780 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 SPOCD1Q6ZMY3 1216 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 ZNF574Q6ZN55 896 aaPredicted RBP5.29□□□□□ -1.56
SDC2-204ENST00000519914 ARHGEF18Q6ZSZ5 1173 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 BBS12Q6ZW61 710 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 ZNF365Q70YC5 407 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 CBLL1Q75N03 491 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 CPLX4Q7Z7G2 160 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 PCGF5Q86SE9 256 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 NT5DC4Q86YG4 428 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 CCNJLQ8IV13 435 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 CCDC50Q8IVM0 306 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 ZBTB8OSQ8IWT0 167 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 THNSL1Q8IYQ7 743 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 LRRC34Q8IZ02 419 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 GPC2Q8N158 579 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 TTC39CQ8N584 583 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms