RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 HOXC6P09630 235 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 ZGLP1P0C6A0 271 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 NAT2P11245 290 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 KRT13P13646 458 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 TCF4P15884 667 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 TNFAIP3P21580 790 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 TNFSF9P41273 254 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 NAMPTP43490 491 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 NOP2P46087 812 aaKnown RBP4.8□□□□□ -1.64
PABPC1-212ENST00000519622 RPL21P46778 160 aaKnown RBP4.8□□□□□ -1.64
PABPC1-212ENST00000519622 DRG2P55039 364 aaKnown RBP4.8□□□□□ -1.64
PABPC1-212ENST00000519622 TAS2R40P59535 323 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 ERVFC1P60507 584 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 NOMO3P69849 1222 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 GPC5P78333 572 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 OGDHQ02218 1023 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 DMP1Q13316 513 aaPredicted RBP4.8□□□□□ -1.64
PABPC1-212ENST00000519622 PDCLQ13371 301 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 CUL1Q13616 776 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 MLANAQ16655 118 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 BRDTQ58F21 947 aaPredicted RBP4.8□□□□□ -1.64
PABPC1-212ENST00000519622 XKR3Q5GH77 459 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 CCDC181Q5TID7 509 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 NAA35Q5VZE5 725 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 ACAD10Q6JQN1 1059 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 CCDC62Q6P9F0 684 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 PRRT2Q7Z6L0 340 aaPredicted RBP4.8□□□□□ -1.64
PABPC1-212ENST00000519622 NLRX1Q86UT6 975 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 ZNF227Q86WZ6 799 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 SLC13A5Q86YT5 568 aaPredicted RBP4.8□□□□□ -1.64
PABPC1-212ENST00000519622 CILP2Q8IUL8 1156 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 BRSK2Q8IWQ3 736 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 MCOLN2Q8IZK6 566 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 SYCP3Q8IZU3 236 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 SYCE1Q8N0S2 351 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 ARHGEF39Q8N4T4 335 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 SLC17A8Q8NDX2 589 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 BVESQ8NE79 360 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 FBXL13Q8NEE6 735 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 MCPH1Q8NEM0 835 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 CHST13Q8NET6 341 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 DNERQ8NFT8 737 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 CTNNBL1Q8WYA6 563 aaPredicted RBP4.8□□□□□ -1.64
PABPC1-212ENST00000519622 JDP2Q8WYK2 163 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.8□□□□□ -1.643e-6■■■■■ 50.8
PABPC1-212ENST00000519622 GLG1Q92896 1179 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 ATP6V0A1Q93050 837 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 TMEM143Q96AN5 459 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 C18orf8Q96DM3 657 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 CLMNQ96JQ2 1002 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 CEP170P1Q96L14 293 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 ATP6V1G3Q96LB4 118 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 IWS1Q96ST2 819 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 FAM213AQ9BRX8 229 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 TARS2Q9BW92 718 aaKnown RBP4.8□□□□□ -1.64
PABPC1-212ENST00000519622 CDADC1Q9BWV3 514 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 KATNBL1Q9H079 304 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 XYLT2Q9H1B5 865 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 ATP6V0A4Q9HBG4 840 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 AS3MTQ9HBK9 375 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 PTPRHQ9HD43 1115 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 KMT5AQ9NQR1 393 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 RAB20Q9NX57 234 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 EURLQ9NYK6 297 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 SIRPGQ9P1W8 387 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 EBF1Q9UH73 591 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 PCYOX1Q9UHG3 505 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 AMFRQ9UKV5 643 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 PLAAQ9Y263 795 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 R3HDM2Q9Y2K5 976 aaKnown RBP4.8□□□□□ -1.64
PABPC1-212ENST00000519622 DIS3Q9Y2L1 958 aaKnown RBP4.8□□□□□ -1.64
PABPC1-212ENST00000519622 GPR55Q9Y2T6 319 aaPredicted RBP4.8□□□□□ -1.64
PABPC1-212ENST00000519622 NUB1Q9Y5A7 615 aa4.8□□□□□ -1.64
PABPC1-212ENST00000519622 FAM221BA6H8Z2 402 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 GOLGA6CA6NDK9 693 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 C5orf60A6NFR6 353 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 SRRM3A6NNA2 597 aaPredicted RBP4.79□□□□□ -1.64
PABPC1-212ENST00000519622 CCDC169A6NNP5 214 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 MIF4GDA9UHW6 222 aaKnown RBP4.79□□□□□ -1.64
PABPC1-212ENST00000519622 ADCY3O60266 1144 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 PPFIA4O75335 1185 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 MAFO75444 373 aaPredicted RBP4.79□□□□□ -1.64
PABPC1-212ENST00000519622 ASS1P00966 412 aaKnown RBP4.79□□□□□ -1.64
PABPC1-212ENST00000519622 ITGAVP06756 1048 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 NUDT17P0C025 328 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 IQCF3P0C7M6 154 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 GOLGA6DP0CG33 693 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 RRM1P23921 792 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 CDH5P33151 784 aaPredicted RBP4.79□□□□□ -1.64
PABPC1-212ENST00000519622 MFAP3P55082 362 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 ADCY2Q08462 1091 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 PPFIA1Q13136 1202 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 CUL2Q13617 745 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 KCNMB1Q16558 191 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 MTERF2Q49AM1 385 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 SPDYCQ5MJ68 293 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 AGBL2Q5U5Z8 902 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 DAB2IPQ5VWQ8 1189 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 EEF1DP3Q658K8 133 aa4.79□□□□□ -1.64
PABPC1-212ENST00000519622 PLEKHA7Q6IQ23 1121 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms