RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 MXI1P50539 228 aa11.45□□□□□ -0.58
PVT1-208ENST00000519481 NOVA1P51513 510 aaKnown RBP11.45□□□□□ -0.58
PVT1-208ENST00000519481 PPP3CAQ08209 521 aa11.45□□□□□ -0.58
PVT1-208ENST00000519481 ST3GAL2Q16842 350 aa11.45□□□□□ -0.58
PVT1-208ENST00000519481 EDRF1Q3B7T1 1238 aa11.45□□□□□ -0.58
PVT1-208ENST00000519481 LYSMD4Q5XG99 296 aa11.45□□□□□ -0.58
PVT1-208ENST00000519481 KRT39Q6A163 491 aa11.45□□□□□ -0.58
PVT1-208ENST00000519481 PSAPL1Q6NUJ1 521 aa11.45□□□□□ -0.58
PVT1-208ENST00000519481 TPGS1Q6ZTW0 290 aa11.45□□□□□ -0.58
PVT1-208ENST00000519481 SYT12Q8IV01 421 aa11.45□□□□□ -0.58
PVT1-208ENST00000519481 TMEFF1Q8IYR6 380 aa11.45□□□□□ -0.58
PVT1-208ENST00000519481 CHPFQ8IZ52 775 aa11.45□□□□□ -0.58
PVT1-208ENST00000519481 ARHGAP18Q8N392 663 aa11.45□□□□□ -0.58
PVT1-208ENST00000519481 HEXIM2Q96MH2 286 aaKnown RBP11.45□□□□□ -0.58
PVT1-208ENST00000519481 TWNKQ96RR1 684 aa11.45□□□□□ -0.58
PVT1-208ENST00000519481 DUSP16Q9BY84 665 aa11.45□□□□□ -0.58
PVT1-208ENST00000519481 APOBEC3GQ9HC16 384 aaKnown RBP11.45□□□□□ -0.58
PVT1-208ENST00000519481 ZDHHC4Q9NPG8 344 aa11.45□□□□□ -0.58
PVT1-208ENST00000519481 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.45□□□□□ -0.583e-6■■■■□ 22.1
PVT1-208ENST00000519481 EVLQ9UI08 416 aaPredicted RBP11.45□□□□□ -0.58
PVT1-208ENST00000519481 ZNF510Q9Y2H8 683 aa11.45□□□□□ -0.58
PVT1-208ENST00000519481 STARD13Q9Y3M8 1113 aa11.45□□□□□ -0.58
PVT1-208ENST00000519481 MYO18AQ92614 2054 aaKnown RBP11.45□□□□□ -0.58
PVT1-208ENST00000519481 CHD8Q9HCK8 2581 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 HHLA1C9JL84 531 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 CACNG3O60359 315 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 ZNF217O75362 1048 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 ZNF202O95125 648 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 PMLP29590 882 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 HOXD12P35452 270 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 WASP42768 502 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 DGKGP49619 791 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 KIF11P52732 1056 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 ATXN3P54252 364 aaPredicted RBP11.44□□□□□ -0.58
PVT1-208ENST00000519481 COG7P83436 770 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 E2F5Q15329 346 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 MAP7D1Q3KQU3 841 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 ZNF394Q53GI3 561 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 TRIM61Q5EBN2 209 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 ARMCX6Q7L4S7 300 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 GPRIN1Q7Z2K8 1008 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 CCDC186Q7Z3E2 898 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 RABEPKQ7Z6M1 372 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 FBXL13Q8NEE6 735 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 WBP2Q969T9 261 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 TSG101Q99816 390 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 DCLK3Q9C098 648 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 FAM124BQ9H5Z6 455 aaPredicted RBP11.44□□□□□ -0.58
PVT1-208ENST00000519481 RMND1Q9NWS8 449 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 CLIC5Q9NZA1 410 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 MARK1Q9P0L2 795 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 RASAL2Q9UJF2 1139 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 STRIP2Q9ULQ0 834 aa11.44□□□□□ -0.58
PVT1-208ENST00000519481 NUP205Q92621 2012 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 GON4LQ3T8J9 2241 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 GOLGA6L4A6NEF3 574 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 PATE3B3GLJ2 98 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 MDM4O15151 490 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 CYBBP04839 570 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 CHRM1P11229 460 aaPredicted RBP11.43□□□□□ -0.58
PVT1-208ENST00000519481 CHKAP35790 457 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 PGFP49763 221 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 YWHAEP62258 255 aaKnown RBP11.43□□□□□ -0.58
PVT1-208ENST00000519481 IRX4P78413 519 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 SHC2P98077 582 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 RPL6Q02878 288 aaKnown RBP11.43□□□□□ -0.58
PVT1-208ENST00000519481 UAP1L1Q3KQV9 507 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 PPP1R26Q5T8A7 1209 aaPredicted RBP11.43□□□□□ -0.58
PVT1-208ENST00000519481 TCERG1LQ5VWI1 586 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 EGFLAMQ63HQ2 1017 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 RSRC2Q7L4I2 434 aaKnown RBP11.43□□□□□ -0.58
PVT1-208ENST00000519481 MIB1Q86YT6 1006 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 ZNF276Q8N554 614 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 CEP76Q8TAP6 659 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 IPO4Q8TEX9 1081 aaKnown RBP11.43□□□□□ -0.58
PVT1-208ENST00000519481 UCMAQ8WVF2 138 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 TMEM176AQ96HP8 235 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 GTPBP4Q9BZE4 634 aaKnown RBP11.43□□□□□ -0.58
PVT1-208ENST00000519481 NMUR1Q9HB89 426 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 CISHQ9NSE2 258 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 OSER1Q9NX31 292 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 RAB20Q9NX57 234 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 NUDT5Q9UKK9 219 aa11.43□□□□□ -0.58
PVT1-208ENST00000519481 GFRA2O00451 464 aa11.42□□□□□ -0.58
PVT1-208ENST00000519481 NPC1O15118 1278 aa11.42□□□□□ -0.58
PVT1-208ENST00000519481 TRIM24O15164 1050 aa11.42□□□□□ -0.58
PVT1-208ENST00000519481 GREM1O60565 184 aa11.42□□□□□ -0.58
PVT1-208ENST00000519481 STC2O76061 302 aa11.42□□□□□ -0.58
PVT1-208ENST00000519481 CFIP05156 583 aa11.42□□□□□ -0.58
PVT1-208ENST00000519481 GABRG2P18507 467 aa11.42□□□□□ -0.58
PVT1-208ENST00000519481 CSRP1P21291 193 aaKnown RBP11.42□□□□□ -0.58
PVT1-208ENST00000519481 PTGER3P43115 390 aa11.42□□□□□ -0.58
PVT1-208ENST00000519481 STARD3Q14849 445 aa11.42□□□□□ -0.58
PVT1-208ENST00000519481 DUOXA1Q1HG43 343 aa11.42□□□□□ -0.58
PVT1-208ENST00000519481 SH3PXD2AQ5TCZ1 1133 aa11.42□□□□□ -0.58
PVT1-208ENST00000519481 BHMTQ93088 406 aa11.42□□□□□ -0.58
PVT1-208ENST00000519481 UBXN6Q9BZV1 441 aa11.42□□□□□ -0.58
PVT1-208ENST00000519481 SLC32A1Q9H598 525 aa11.42□□□□□ -0.58
PVT1-208ENST00000519481 CALCOCO1Q9P1Z2 691 aa11.42□□□□□ -0.58
PVT1-208ENST00000519481 MBD1Q9UIS9 605 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms