RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 ENPP2Q13822 863 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 STARD3Q14849 445 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 PSMD6Q15008 389 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 SNRNP35Q16560 246 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 CCDC73Q6ZRK6 1079 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 SPRYD3Q8NCJ5 442 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 C1orf216Q8TAB5 229 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 ADAM32Q8TC27 787 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 ERLEC1Q96DZ1 483 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 SMARCD1Q96GM5 515 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 TMX3Q96JJ7 454 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 GPR174Q9BXC1 333 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 TRIM9Q9C026 710 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 MKRN2Q9H000 416 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 CYLDQ9NQC7 956 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 FBXO2Q9UK22 296 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 LSM7Q9UK45 103 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 SRPRBQ9Y5M8 271 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 STON1Q9Y6Q2 735 aa13.05□□□□□ -0.32
TRAPPC9-204ENST00000518723 PTPRBP23467 1997 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 TRABD2BA6NFA1 517 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 METTL12A8MUP2 240 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 KCNJ18B7U540 433 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 TNNI1P19237 187 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 OXTRP30559 389 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 HOXD13P35453 343 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 PGFP49763 221 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 TPMTP51580 245 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 CYP24A1Q07973 514 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 CYP4F3Q08477 520 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 GOLGA8FQ08AF8 430 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 GOLGA8DPQ0D2H9 430 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 RABEP1Q15276 862 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 HLA-BQ31612 363 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 DCAF12L1Q5VU92 463 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 LARP1BQ659C4 914 aaKnown RBP13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 TPGS1Q6ZTW0 290 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 CCDC65Q8IXS2 484 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 RHBDD1Q8TEB9 315 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 SYAP1Q96A49 352 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 TNIP3Q96KP6 325 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 UBL7Q96S82 380 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 MIR1-1HGQ9H1L0 117 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 PCED1AQ9H1Q7 454 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 FBXO44Q9H4M3 255 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 VRTNQ9H8Y1 702 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 CSNK1G1Q9HCP0 422 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 TLR8Q9NR97 1041 aaKnown RBP13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 THAP10Q9P2Z0 257 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 SLC27A6Q9Y2P4 619 aa13.04□□□□□ -0.32
TRAPPC9-204ENST00000518723 E9PAM4 449 aa13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 TK2O00142 265 aa13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 EIF3DO15371 548 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 AP1G2O75843 785 aa13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 TBX18O95935 607 aa13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 ACO1P21399 889 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 ATP5C1P36542 298 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 STAT6P42226 847 aa13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 MYL6P60660 151 aa13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 TRPC3Q13507 836 aa13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 SUZ12Q15022 739 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 SMAD1Q15797 465 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 KLHDC10Q6PID8 442 aa13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 Q6ZNB5 142 aa13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 FUKQ8N0W3 1084 aa13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 PDCD7Q8N8D1 485 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 ZMIZ2Q8NF64 920 aa13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 SMOQ99835 787 aa13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 MED10Q9BTT4 135 aa13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 GZF1Q9H116 711 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 KRT82Q9NSB4 513 aa13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 NXF1Q9UBU9 619 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 SMC3Q9UQE7 1217 aa13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 CLIC4Q9Y696 253 aa13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 KNL1Q8NG31 2342 aa13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 CABIN1Q9Y6J0 2220 aa13.03□□□□□ -0.32
TRAPPC9-204ENST00000518723 TNFSF14O43557 240 aa13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 ZIC2O95409 532 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 PENKP01210 267 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 IL12RB1P42701 662 aa13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 AFF3P51826 1226 aaKnown RBP13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 SNRPFP62306 86 aaKnown RBP13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 C19orf57Q0VDD7 668 aa13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 E2F5Q15329 346 aa13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 PTPRNQ16849 979 aa13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 EPM2AIP1Q7L775 607 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 TMPRSS6Q8IU80 811 aa13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 RDH13Q8NBN7 331 aa13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 ZNF507Q8TCN5 953 aa13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 ZNF516Q92618 1163 aa13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 PRCCQ92733 491 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 CCDC127Q96BQ5 260 aa13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 SIPA1Q96FS4 1042 aa13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 P2RY11Q96G91 374 aa13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 CLIC6Q96NY7 704 aa13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 NUP58Q9BVL2 599 aa13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 SMYD3Q9H7B4 428 aa13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 OSGEPQ9NPF4 335 aa13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 AGPAT3Q9NRZ7 376 aa13.02□□□□□ -0.33
TRAPPC9-204ENST00000518723 EIF2B4Q9UI10 523 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms