RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 AP4M1O00189 453 aa5.2□□□□□ -1.58
SQLE-202ENST00000518604 CES2O00748 559 aa5.2□□□□□ -1.58
SQLE-202ENST00000518604 FGAP02671 866 aa5.2□□□□□ -1.58
SQLE-202ENST00000518604 ELFN1P0C7U0 828 aa5.2□□□□□ -1.58
SQLE-202ENST00000518604 MMP8P22894 467 aa5.2□□□□□ -1.58
SQLE-202ENST00000518604 AASDHQ4L235 1098 aaPredicted RBP5.2□□□□□ -1.58
SQLE-202ENST00000518604 PCID2Q5JVF3 399 aa5.2□□□□□ -1.58
SQLE-202ENST00000518604 ATPAF1Q5TC12 328 aaPredicted RBP5.2□□□□□ -1.58
SQLE-202ENST00000518604 PNPLA1Q8N8W4 532 aa5.2□□□□□ -1.58
SQLE-202ENST00000518604 PAAF1Q9BRP4 392 aa5.2□□□□□ -1.58
SQLE-202ENST00000518604 DUSP26Q9BV47 211 aa5.2□□□□□ -1.58
SQLE-202ENST00000518604 TMEM120AQ9BXJ8 343 aa5.2□□□□□ -1.58
SQLE-202ENST00000518604 ALG13Q9NP73 1137 aaKnown RBP5.2□□□□□ -1.58
SQLE-202ENST00000518604 USP1O94782 785 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 ENGP17813 658 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 DRD4P21917 467 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 PROZP22891 400 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 PBX1P40424 430 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 GSTM5P46439 218 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 CDK7P50613 346 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 DNASE1L3Q13609 305 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 TRIM60Q495X7 471 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 C4orf46Q504U0 113 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 FAM90A2PQ658T7 463 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 KLHL17Q6TDP4 642 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 RFX8Q6ZV50 586 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 CCDC117Q8IWD4 279 aaPredicted RBP5.19□□□□□ -1.58
SQLE-202ENST00000518604 STT3BQ8TCJ2 826 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 OTUD7AQ8TE49 926 aaPredicted RBP5.19□□□□□ -1.58
SQLE-202ENST00000518604 TRIM63Q969Q1 353 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 UROC1Q96N76 676 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 BBC3Q96PG8 261 aaPredicted RBP5.19□□□□□ -1.58
SQLE-202ENST00000518604 LENG8Q96PV6 779 aaPredicted RBP5.19□□□□□ -1.58
SQLE-202ENST00000518604 RTKNQ9BST9 563 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 PCED1AQ9H1Q7 454 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 GAR1Q9NY12 217 aaKnown RBP5.19□□□□□ -1.58
SQLE-202ENST00000518604 TFCP2L1Q9NZI6 479 aa5.19□□□□□ -1.58
SQLE-202ENST00000518604 SCAF8Q9UPN6 1271 aaKnown RBP5.19□□□□□ -1.58
SQLE-202ENST00000518604 GXYLT2A0PJZ3 443 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 EFCAB8A8MWE9 144 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 TRIM38O00635 465 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 FCHO1O14526 889 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 DNPH1O43598 174 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 PIP5K1CO60331 668 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 TAF5LO75529 589 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 TNFRSF6BO95407 300 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 FSHBP01225 129 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 LMNAP02545 664 aaKnown RBP5.18□□□□□ -1.58
SQLE-202ENST00000518604 ZNF37AP17032 561 aaPredicted RBP5.18□□□□□ -1.58
SQLE-202ENST00000518604 MCM5P33992 734 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 TGFB2P61812 414 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 SEMA3BQ13214 749 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 PRKG1Q13976 671 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 TMEM196Q5HYL7 178 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 L1TD1Q5T7N2 865 aaKnown RBP5.18□□□□□ -1.58
SQLE-202ENST00000518604 CCDC144NLQ6NUI1 221 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 RINT1Q6NUQ1 792 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 CEP85Q6P2H3 762 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 OLFML1Q6UWY5 402 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 DPY19L3Q6ZPD9 716 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 SLC29A4Q7RTT9 530 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 GALNT15Q8N3T1 639 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 EIF3CQ99613 913 aaKnown RBP5.18□□□□□ -1.58
SQLE-202ENST00000518604 DDX23Q9BUQ8 820 aaKnown RBP5.18□□□□□ -1.58
SQLE-202ENST00000518604 CINPQ9BW66 212 aaPredicted RBP5.18□□□□□ -1.58
SQLE-202ENST00000518604 EPS8L2Q9H6S3 715 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 GRHPRQ9UBQ7 328 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 TLK1Q9UKI8 766 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 ST3GAL5Q9UNP4 418 aa5.18□□□□□ -1.58
SQLE-202ENST00000518604 CTIFO43310 598 aaKnown RBP5.17□□□□□ -1.58
SQLE-202ENST00000518604 JTBO76095 146 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 ACTL6BO94805 426 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 HSD3B1P14060 373 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 VEGFAP15692 232 aaPredicted RBP5.17□□□□□ -1.58
SQLE-202ENST00000518604 DRD1P21728 446 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 ITPKBP27987 946 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 PLA2G5P39877 138 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 CCT5P48643 541 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 DIO1P49895 249 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 ARL4CP56559 192 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 AP2B1P63010 937 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 TXNL4AP83876 142 aaKnown RBP5.17□□□□□ -1.58
SQLE-202ENST00000518604 HOXA4Q00056 320 aaPredicted RBP5.17□□□□□ -1.58
SQLE-202ENST00000518604 KLF10Q13118 480 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 GRM4Q14833 912 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 GRHL2Q6ISB3 625 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 PCSK4Q6UW60 755 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 PIK3AP1Q6ZUJ8 805 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 RAB11FIP2Q7L804 512 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 TRABD2AQ86V40 505 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 RASAL3Q86YV0 1011 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 P3H2Q8IVL5 708 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 SLC44A2Q8IWA5 706 aaPredicted RBP5.17□□□□□ -1.58
SQLE-202ENST00000518604 C12orf76Q8N812 135 aaPredicted RBP5.17□□□□□ -1.58
SQLE-202ENST00000518604 FAM71DQ8N9W8 422 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 SIMC1Q8NDZ2 872 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 SCLT1Q96NL6 688 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 SNX18Q96RF0 628 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 PABPC3Q9H361 631 aaKnown RBP5.17□□□□□ -1.58
SQLE-202ENST00000518604 FSCN3Q9NQT6 498 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms