RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 APBB2Q92870 758 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 CAPNS2Q96L46 248 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 ZFP42Q96MM3 310 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 SYT15Q9BQS2 421 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 POPDC2Q9HBU9 364 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 ARHGEF38Q9NXL2 777 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 PAK5Q9P286 719 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 A0A087WUV0 522 aaPredicted RBP8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 MEIS3P2A8K0S8 358 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 E7EVH7 732 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 PITPNM1O00562 1244 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 MCF2LO15068 1137 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 CACNG3O60359 315 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 CXCL10P02778 98 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 FAM200BP0CF97 657 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 CYP2C18P33260 490 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 MAGEA11P43364 429 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 CDK16Q00536 496 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 ROR1Q01973 937 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 SEMA5AQ13591 1074 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 GPNMBQ14956 572 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 RAB6CQ53S08 254 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 SLC45A4Q5BKX6 768 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 CYP4F22Q6NT55 531 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 RTN4RL1Q86UN2 441 aaPredicted RBP8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 CDKL3Q8IVW4 592 aaPredicted RBP8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 COLGALT2Q8IYK4 626 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 ZNF317Q96PQ6 595 aaPredicted RBP8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 CSPG4P5Q96PW8 444 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 OSBPL7Q9BZF2 842 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 ZCWPW1Q9H0M4 648 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 RAB6CQ9H0N0 254 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 FAM49BQ9NUQ9 324 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 MKS1Q9NXB0 559 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 DDX43Q9NXZ2 648 aaKnown RBP8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 KLK14Q9P0G3 267 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 TEX264Q9Y6I9 313 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 A0A1W2PQ45 241 aaPredicted RBP8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 A0A1W2PQY0 241 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 PPP1R12AO14974 1030 aaPredicted RBP8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 HCRTO43612 131 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 TBC1D4O60343 1298 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 BEST1O76090 585 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 FAM107AO95990 144 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 MLNP12872 115 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 MAGEA4P43358 317 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 CXCR3P49682 368 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 YWHAZP63104 245 aaKnown RBP8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 TIGD5Q53EQ6 642 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 MANEALQ5VSG8 457 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 STEAP4Q687X5 459 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 PPP1R21Q6ZMI0 780 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 TADA2BQ86TJ2 420 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 UNC45BQ8IWX7 931 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 SCUBE3Q8IX30 993 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 SH2D3CQ8N5H7 860 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 CLEC4CQ8WTT0 213 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 PCED1BQ96HM7 432 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 FUBP3Q96I24 572 aaKnown RBP eCLIP8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 TMEM121Q9BTD3 319 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 TRIM31Q9BZY9 425 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 ZWILCHQ9H900 591 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 PAK6Q9NQU5 681 aaPredicted RBP8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 TMEM30AQ9NV96 361 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 KLHL11Q9NVR0 708 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 SENP1Q9P0U3 644 aa8.34□□□□□ -1.07
ARFGEF1-204ENST00000518290 SYN3O14994 580 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 CDH16O75309 829 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 PARNO95453 639 aaKnown RBP8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 OAS1P00973 400 aaKnown RBP8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 TFE3P19532 575 aaPredicted RBP8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 CD52P31358 61 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 CTCFP49711 727 aaPredicted RBP8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 GPX6P59796 221 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 EIF3EP60228 445 aaKnown RBP8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 CA9Q16790 459 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 AFMIDQ63HM1 303 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 MSANTD2Q6P1R3 559 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 SLC24A5Q71RS6 500 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 BZW1Q7L1Q6 419 aaKnown RBP8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 RNF168Q8IYW5 571 aaPredicted RBP8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 CCDC114Q96M63 670 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 RBM15Q96T37 977 aaKnown RBP eCLIP8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 GAD1Q99259 594 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 OSBPL2Q9H1P3 480 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 PLEKHA4Q9H4M7 779 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 ABT1Q9ULW3 272 aaKnown RBP8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 AP4E1Q9UPM8 1137 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 WASH4PA8MWX3 477 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 DCDC2CA8MYV0 355 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 ARVCFO00192 962 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 DNM1LO00429 736 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 RASGRF2O14827 1237 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 F9P00740 461 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 LMAN1P49257 510 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 CDH6P55285 790 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 SLC8A3P57103 927 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 SMTNL2Q2TAL5 461 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 KRT71Q3SY84 523 aa8.33□□□□□ -1.08
ARFGEF1-204ENST00000518290 PLEKHG4Q58EX7 1191 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms