RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 PRCPP42785 496 aa9.12□□□□□ -0.95
PABPC1-202ENST00000517403 SGSHP51688 502 aa9.12□□□□□ -0.95
PABPC1-202ENST00000517403 N4BP2L1Q5TBK1 243 aaPredicted RBP9.12□□□□□ -0.95
PABPC1-202ENST00000517403 ATL3Q6DD88 541 aa9.12□□□□□ -0.95
PABPC1-202ENST00000517403 CACNA2D4Q7Z3S7 1137 aa9.12□□□□□ -0.95
PABPC1-202ENST00000517403 FAM186BQ8IYM0 893 aa9.12□□□□□ -0.95
PABPC1-202ENST00000517403 GUF1Q8N442 669 aaKnown RBP9.12□□□□□ -0.95
PABPC1-202ENST00000517403 DEFB119Q8N690 84 aa9.12□□□□□ -0.95
PABPC1-202ENST00000517403 TERB1Q8NA31 727 aa9.12□□□□□ -0.95
PABPC1-202ENST00000517403 TSTD1Q8NFU3 115 aa9.12□□□□□ -0.95
PABPC1-202ENST00000517403 LRRN4Q8WUT4 740 aa9.12□□□□□ -0.95
PABPC1-202ENST00000517403 TFAP2BQ92481 460 aa9.12□□□□□ -0.95
PABPC1-202ENST00000517403 CEP295NLQ96MC4 621 aa9.12□□□□□ -0.95
PABPC1-202ENST00000517403 SLITRK1Q96PX8 696 aa9.12□□□□□ -0.95
PABPC1-202ENST00000517403 HNRNPABQ99729 332 aaKnown RBP9.12□□□□□ -0.95
PABPC1-202ENST00000517403 NIF3L1Q9GZT8 377 aa9.12□□□□□ -0.95
PABPC1-202ENST00000517403 ARHGEF4Q9NR80 690 aa9.12□□□□□ -0.95
PABPC1-202ENST00000517403 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.12□□□□□ -0.95
PABPC1-202ENST00000517403 CGNQ9P2M7 1197 aaKnown RBP9.12□□□□□ -0.95
PABPC1-202ENST00000517403 RALYQ9UKM9 306 aaKnown RBP9.12□□□□□ -0.95
PABPC1-202ENST00000517403 RAB23Q9ULC3 237 aa9.12□□□□□ -0.95
PABPC1-202ENST00000517403 USP24Q9UPU5 2620 aa9.12□□□□□ -0.95
PABPC1-202ENST00000517403 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 A0A1W2PQ27 194 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 A0A1W2PQ64 194 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 A0A1W2PQD8 194 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 TCRBV21S2A2A0A5A6 115 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 PRR5-ARHGAP8B1AHC4 643 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 GFRA2O00451 464 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 CACNG3O60359 315 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 RTN3O95197 1032 aaPredicted RBP9.11□□□□□ -0.95
PABPC1-202ENST00000517403 FAM200BP0CF97 657 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 PFKLP17858 780 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 ACO1P21399 889 aaKnown RBP9.11□□□□□ -0.95
PABPC1-202ENST00000517403 TUBP50607 506 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 KIF11P52732 1056 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 KRT85P78386 507 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 IRX4P78413 519 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 ARHGAP8P85298 464 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 CREB5Q02930 508 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 PPP2R5DQ14738 602 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 SGSM1Q2NKQ1 1148 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 FBXO43Q4G163 708 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 ARSIQ5FYB1 569 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 C10orf76Q5T2E6 689 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 HECTD3Q5T447 861 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 TMEM215Q68D42 235 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 ANKRD40Q6AI12 368 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 TPGS1Q6ZTW0 290 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 SLC41A1Q8IVJ1 513 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 TMEFF1Q8IYR6 380 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 CAMKK1Q8N5S9 505 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 SPATA20Q8TB22 786 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 WFDC5Q8TCV5 224 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 HMGB4Q8WW32 186 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 SORCS1Q8WY21 1168 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 OVCA2Q8WZ82 227 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 SLC39A7Q92504 469 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 ACDQ96AP0 544 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 MED15Q96RN5 788 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 PNKPQ96T60 521 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 DUSP9Q99956 384 aaKnown RBP9.11□□□□□ -0.95
PABPC1-202ENST00000517403 EDEM2Q9BV94 578 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 TMEM8AQ9HCN3 771 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 SPHK2Q9NRA0 654 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.11□□□□□ -0.95
PABPC1-202ENST00000517403 CALCOCO1Q9P1Z2 691 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 CFAP45Q9UL16 551 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 SCML2Q9UQR0 700 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 USP3Q9Y6I4 520 aa9.11□□□□□ -0.95
PABPC1-202ENST00000517403 TP53BP1Q12888 1972 aaPredicted RBP9.11□□□□□ -0.95
PABPC1-202ENST00000517403 NEDD8-MDP1E9PL57 170 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 RNF225M0QZC1 329 aaPredicted RBP9.1□□□□□ -0.95
PABPC1-202ENST00000517403 IKBKBO14920 756 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 MAPK13O15264 365 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 MSI1O43347 362 aaKnown RBP9.1□□□□□ -0.95
PABPC1-202ENST00000517403 HSP90AA1P07900 732 aaKnown RBP9.1□□□□□ -0.95
PABPC1-202ENST00000517403 RARGP13631 454 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 EIF2DP41214 584 aaKnown RBP9.1□□□□□ -0.95
PABPC1-202ENST00000517403 LIMK1P53667 647 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 FAM193AP78312 1265 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 GEN1Q17RS7 908 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 AASDHQ4L235 1098 aaPredicted RBP9.1□□□□□ -0.95
PABPC1-202ENST00000517403 PKDCCQ504Y2 493 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 RAB41Q5JT25 222 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 FYB2Q5VWT5 728 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 ISM2Q6H9L7 571 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 HTR3DQ70Z44 454 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 PIGZQ86VD9 579 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 UNC93AQ86WB7 457 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 ARHGEF19Q8IW93 802 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 PDZD8Q8NEN9 1154 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 LMO3Q8TAP4 145 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 GOLGA5Q8TBA6 731 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 CLEC4CQ8WTT0 213 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 SLC35C1Q96A29 364 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 CYFIP2Q96F07 1278 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 LOXL4Q96JB6 756 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 CISHQ9NSE2 258 aa9.1□□□□□ -0.95
PABPC1-202ENST00000517403 DNAJC17Q9NVM6 304 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms