RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 PNPLA1Q8N8W4 532 aa6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 SCARB1Q8WTV0 552 aa6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 IGFBPL1Q8WX77 278 aa6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 SMG7Q92540 1137 aaKnown RBP6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 HS6ST2Q96MM7 605 aa6.15□□□□□ -1.42
SCARNA1-201ENST00000517138 CYP2D7A0A087X1C5 515 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 ADAM10O14672 748 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 KIF3BO15066 747 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 KCNQ3O43525 872 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 TOP3BO95985 862 aaKnown RBP6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 HARSP12081 509 aaKnown RBP6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 GABRB3P28472 473 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 GALNSP34059 522 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 ZNF268Q14587 947 aaPredicted RBP6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 KCNB1Q14721 858 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 CLCA4Q14CN2 919 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 ACOX1Q15067 660 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 ST3GAL2Q16842 350 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 AASDHQ4L235 1098 aaPredicted RBP6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 MEX3CQ5U5Q3 659 aaKnown RBP6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 RANBP10Q6VN20 620 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 GLCCI1Q86VQ1 547 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 P3H2Q8IVL5 708 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 CCDC28AQ8IWP9 274 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 MAP4K1Q92918 833 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 RPL36ALQ969Q0 106 aaKnown RBP6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 GDF15Q99988 308 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 FNIP2Q9P278 1114 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 FZD4Q9ULV1 537 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 MAN2B2Q9Y2E5 1009 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 PCDHB2Q9Y5E7 798 aa6.14□□□□□ -1.43
SCARNA1-201ENST00000517138 C16orf96A6NNT2 1141 aa6.13□□□□□ -1.43
SCARNA1-201ENST00000517138 MST1P26927 711 aa6.13□□□□□ -1.43
SCARNA1-201ENST00000517138 HOXD9P28356 352 aaPredicted RBP6.13□□□□□ -1.43
SCARNA1-201ENST00000517138 GPS1Q13098 491 aa6.13□□□□□ -1.43
SCARNA1-201ENST00000517138 TMTC4Q5T4D3 741 aa6.13□□□□□ -1.43
SCARNA1-201ENST00000517138 DENND2CQ68D51 928 aa6.13□□□□□ -1.43
SCARNA1-201ENST00000517138 OSR1Q8TAX0 266 aaPredicted RBP6.13□□□□□ -1.43
SCARNA1-201ENST00000517138 VPS50Q96JG6 964 aa6.13□□□□□ -1.43
SCARNA1-201ENST00000517138 WDR24Q96S15 920 aa6.13□□□□□ -1.43
SCARNA1-201ENST00000517138 GAR1Q9NY12 217 aaKnown RBP6.13□□□□□ -1.43
SCARNA1-201ENST00000517138 ZMYND8Q9ULU4 1186 aaPredicted RBP6.13□□□□□ -1.43
SCARNA1-201ENST00000517138 VPS4AQ9UN37 437 aa6.13□□□□□ -1.43
SCARNA1-201ENST00000517138 E5RJQ4 531 aa6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 PHKG2P15735 406 aa6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 PECAM1P16284 738 aaPredicted RBP6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 TNFSF4P23510 183 aa6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 YPEL5P62699 121 aa6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 RAE1P78406 368 aaKnown RBP6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 TXNL4AP83876 142 aaKnown RBP6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 DNASE1L3Q13609 305 aa6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 LONRF1Q17RB8 773 aa6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 ARHGAP15Q53QZ3 475 aa6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 FAM209BQ5JX69 171 aa6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 FAXCQ5TGI0 409 aa6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 LRCH2Q5VUJ6 765 aa6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 IL31Q6EBC2 164 aa6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 GLIS1Q8NBF1 620 aa6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 MAGEB5Q9BZ81 275 aa6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 PCDHAC1Q9H158 963 aa6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 ZBTB26Q9HCK0 441 aa6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 MLXIPLQ9NP71 852 aa6.12□□□□□ -1.43
SCARNA1-201ENST00000517138 TMIGD3P0DMS9 266 aaPredicted RBP6.11□□□□□ -1.43
SCARNA1-201ENST00000517138 MYL4P12829 197 aa6.11□□□□□ -1.43
SCARNA1-201ENST00000517138 DRD1P21728 446 aa6.11□□□□□ -1.43
SCARNA1-201ENST00000517138 IFIT5Q13325 482 aaKnown RBP6.11□□□□□ -1.43
SCARNA1-201ENST00000517138 KPNB1Q14974 876 aaKnown RBP6.11□□□□□ -1.43
SCARNA1-201ENST00000517138 SLC35G1Q2M3R5 365 aa6.11□□□□□ -1.43
SCARNA1-201ENST00000517138 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.11□□□□□ -1.43
SCARNA1-201ENST00000517138 FAM71DQ8N9W8 422 aa6.11□□□□□ -1.43
SCARNA1-201ENST00000517138 RIPOR3Q96MK2 946 aa6.11□□□□□ -1.43
SCARNA1-201ENST00000517138 COLEC11Q9BWP8 271 aa6.11□□□□□ -1.43
SCARNA1-201ENST00000517138 VPS16Q9H269 839 aa6.11□□□□□ -1.43
SCARNA1-201ENST00000517138 TMEM8AQ9HCN3 771 aa6.11□□□□□ -1.43
SCARNA1-201ENST00000517138 STARD7Q9NQZ5 370 aa6.11□□□□□ -1.43
SCARNA1-201ENST00000517138 SEMA5BQ9P283 1151 aa6.11□□□□□ -1.43
SCARNA1-201ENST00000517138 RRHO14718 337 aa6.1□□□□□ -1.43
SCARNA1-201ENST00000517138 COQ9O75208 318 aa6.1□□□□□ -1.43
SCARNA1-201ENST00000517138 TM4SF4P48230 202 aa6.1□□□□□ -1.43
SCARNA1-201ENST00000517138 NEK3P51956 506 aa6.1□□□□□ -1.43
SCARNA1-201ENST00000517138 CCDC15Q0P6D6 951 aa6.1□□□□□ -1.43
SCARNA1-201ENST00000517138 GAB1Q13480 694 aa6.1□□□□□ -1.43
SCARNA1-201ENST00000517138 KCNJ12Q14500 433 aa6.1□□□□□ -1.43
SCARNA1-201ENST00000517138 RABEP1Q15276 862 aa6.1□□□□□ -1.43
SCARNA1-201ENST00000517138 ARL13BQ3SXY8 428 aa6.1□□□□□ -1.43
SCARNA1-201ENST00000517138 TMEM196Q5HYL7 178 aa6.1□□□□□ -1.43
SCARNA1-201ENST00000517138 CC2D1BQ5T0F9 858 aaKnown RBP6.1□□□□□ -1.43
SCARNA1-201ENST00000517138 BEND5Q7L4P6 421 aa6.1□□□□□ -1.43
SCARNA1-201ENST00000517138 TFAP2DQ7Z6R9 452 aa6.1□□□□□ -1.43
SCARNA1-201ENST00000517138 TXLNBQ8N3L3 684 aa6.1□□□□□ -1.43
SCARNA1-201ENST00000517138 ZNF48Q96MX3 618 aaPredicted RBP6.1□□□□□ -1.43
SCARNA1-201ENST00000517138 FAM118BQ9BPY3 351 aa6.1□□□□□ -1.43
SCARNA1-201ENST00000517138 FAM234BA2RU67 622 aa6.09□□□□□ -1.43
SCARNA1-201ENST00000517138 M0QZQ0 153 aa6.09□□□□□ -1.43
SCARNA1-201ENST00000517138 DSCR3O14972 297 aa6.09□□□□□ -1.43
SCARNA1-201ENST00000517138 MOSPD3O75425 235 aa6.09□□□□□ -1.43
SCARNA1-201ENST00000517138 CYP19A1P11511 503 aaPredicted RBP6.09□□□□□ -1.43
SCARNA1-201ENST00000517138 KRTAP10-11P60412 298 aa6.09□□□□□ -1.43
SCARNA1-201ENST00000517138 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms