RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 MIS12Q9H081 205 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 LMAN1LQ9HAT1 526 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 FBRSL1Q9HCM7 1045 aaKnown RBP11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 NLRC4Q9NPP4 1024 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 MARCH2Q9P0N8 246 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 RAPGEFL1Q9UHV5 662 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 NDRG2Q9UN36 371 aaKnown RBP11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 HCN4Q9Y3Q4 1203 aa11.68□□□□□ -0.54
SCARNA20-201ENST00000516768 ZNF318Q5VUA4 2279 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 E5RJQ4 531 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 PAPSS1O43252 624 aaPredicted RBP11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 SART1O43290 800 aaKnown RBP11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 STC2O76061 302 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 SERPINC1P01008 464 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 KLKB1P03952 638 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 CDH5P33151 784 aaPredicted RBP11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 STAT1P42224 750 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 MAGEA9P43362 315 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 SNX16P57768 344 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 TPM4P67936 248 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 PDCLQ13371 301 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 PON2Q15165 354 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 TMEM196Q5HYL7 178 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 Q6ZNB5 142 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 BEND5Q7L4P6 421 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 NOP9Q86U38 636 aaKnown RBP11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 BBS7Q8IWZ6 715 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 PPP1R13BQ96KQ4 1090 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 SPAG5Q96R06 1193 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 CPXM1Q96SM3 734 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 SPHK2Q9NRA0 654 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 STRIP2Q9ULQ0 834 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 ZNF510Q9Y2H8 683 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 PATJQ8NI35 1801 aa11.67□□□□□ -0.54
SCARNA20-201ENST00000516768 A0A0A0MRY4 1105 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 A0A1W2PQC6 194 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 SLC12A8A0AV02 714 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 GOLGA6L19H0YKK7 550 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 SCAMP3O14828 347 aaKnown RBP11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 GFPT2O94808 682 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 CYP17A1P05093 508 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 IRF1P10914 325 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 YWHAZP63104 245 aaKnown RBP11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 GRSF1Q12849 480 aaKnown RBP eCLIP11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 CCINQ13939 588 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 TRIP4Q15650 581 aaPredicted RBP11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 GAB4Q2WGN9 574 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 DGKKQ5KSL6 1271 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 LY6G5CQ5SRR4 150 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 MSANTD2Q6P1R3 559 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 ZNF677Q86XU0 584 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 TMEM25Q86YD3 366 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 PASD1Q8IV76 773 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 C1orf210Q8IVY1 113 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 SYNPOQ8N3V7 929 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 TMEM35BQ8NCS4 154 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 EPS8L1Q8TE68 723 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 GOLGA1Q92805 767 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 EXOC4Q96A65 974 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 NOX5Q96PH1 765 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 P2RY13Q9BPV8 354 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 DCLK3Q9C098 648 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 PDCL3Q9H2J4 239 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 TJP2Q9UDY2 1190 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 SFMBT1Q9UHJ3 866 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 RASAL2Q9UJF2 1139 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 NOCTQ9UK39 431 aaKnown RBP11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 LSM7Q9UK45 103 aaKnown RBP11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 HBS1LQ9Y450 684 aaKnown RBP11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 CEP83Q9Y592 693 aa11.66□□□□□ -0.54
SCARNA20-201ENST00000516768 COL4A3Q01955 1670 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 TICRRQ7Z2Z1 1910 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 ADH1CP00326 375 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 GLI1P08151 1106 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 HMBSP08397 361 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 MMEP08473 750 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 NCAM1P13591 858 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 CHRNB2P17787 502 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 DRD1P21728 446 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 CHKAP35790 457 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 OPRD1P41143 372 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 GABRB2P47870 512 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 UBASH3AP57075 661 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 FANCCQ00597 558 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 CDR2Q01850 454 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 GAD2Q05329 585 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 TCF15Q12870 199 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 EFHC1Q5JVL4 640 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 TAF3Q5VWG9 929 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 SYPL2Q5VXT5 272 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 FSTL4Q6MZW2 842 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 LRSAM1Q6UWE0 723 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 FMNL3Q8IVF7 1028 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 C1orf131Q8NDD1 294 aaKnown RBP11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 PRSS33Q8NF86 280 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 CD101Q93033 1021 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 TRIM62Q9BVG3 475 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 IRF2BPLQ9H1B7 796 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 POPDC2Q9HBU9 364 aa11.65□□□□□ -0.54
SCARNA20-201ENST00000516768 AGO1Q9UL18 857 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms