RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 SARNPP82979 210 aaKnown RBP15.42■□□□□ 0.06
NUP54-217ENST00000514987 MAP2K5Q13163 448 aa15.42■□□□□ 0.06
NUP54-217ENST00000514987 DNAJC3Q13217 504 aa15.42■□□□□ 0.06
NUP54-217ENST00000514987 SLC1A5Q15758 541 aa15.42■□□□□ 0.06
NUP54-217ENST00000514987 PPP6R3Q5H9R7 873 aaPredicted RBP15.42■□□□□ 0.06
NUP54-217ENST00000514987 TLK2Q86UE8 772 aa15.42■□□□□ 0.06
NUP54-217ENST00000514987 VPS52Q8N1B4 723 aa15.42■□□□□ 0.06
NUP54-217ENST00000514987 ZNF75CPQ92670 426 aaPredicted RBP15.42■□□□□ 0.06
NUP54-217ENST00000514987 KIF9Q9HAQ2 790 aa15.42■□□□□ 0.06
NUP54-217ENST00000514987 XAB2Q9HCS7 855 aaKnown RBP15.42■□□□□ 0.06
NUP54-217ENST00000514987 TXLNGQ9NUQ3 528 aa15.42■□□□□ 0.06
NUP54-217ENST00000514987 GPATCH2LQ9NWQ4 482 aa15.42■□□□□ 0.06
NUP54-217ENST00000514987 AP4E1Q9UPM8 1137 aa15.42■□□□□ 0.06
NUP54-217ENST00000514987 PIN4Q9Y237 131 aaKnown RBP15.42■□□□□ 0.06
NUP54-217ENST00000514987 NME7Q9Y5B8 376 aa15.42■□□□□ 0.06
NUP54-217ENST00000514987 SLC8A1P32418 973 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 ARL4AP40617 200 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 MATKP42679 507 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 NCALDP61601 193 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 YWHAZP63104 245 aaKnown RBP15.41■□□□□ 0.06
NUP54-217ENST00000514987 CDK16Q00536 496 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 PTK7Q13308 1070 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 EFTUD2Q15029 972 aaKnown RBP eCLIP15.41■□□□□ 0.06
NUP54-217ENST00000514987 RAB6CQ53S08 254 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 GLRA4Q5JXX5 417 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 MORN1Q5T089 497 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 TTC39BQ5VTQ0 682 aaPredicted RBP15.41■□□□□ 0.06
NUP54-217ENST00000514987 FAM47EQ6ZV65 393 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 SLC26A11Q86WA9 606 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 HACE1Q8IYU2 909 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 TAB3Q8N5C8 712 aaPredicted RBP15.41■□□□□ 0.06
NUP54-217ENST00000514987 FITM2Q8N6M3 262 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 DNAJB3Q8WWF6 145 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 QKIQ96PU8 341 aaKnown RBP eCLIP15.41■□□□□ 0.06
NUP54-217ENST00000514987 HNRNPABQ99729 332 aaKnown RBP15.41■□□□□ 0.06
NUP54-217ENST00000514987 RAB6CQ9H0N0 254 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 AP5M1Q9H0R1 490 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 DPEP3Q9H4B8 488 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 DHX35Q9H5Z1 703 aaKnown RBP15.41■□□□□ 0.06
NUP54-217ENST00000514987 HES2Q9Y543 173 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 ADCY6O43306 1168 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 KRT37O76014 449 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 PDGFRBP09619 1106 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 TROVE2P10155 538 aaKnown RBP eCLIP15.41■□□□□ 0.06
NUP54-217ENST00000514987 NQO1P15559 274 aaKnown RBP15.41■□□□□ 0.06
NUP54-217ENST00000514987 PRKCHP24723 683 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 ADORA2BP29275 332 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 SLC18A2Q05940 514 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 SF3A3Q12874 501 aaKnown RBP eCLIP15.41■□□□□ 0.06
NUP54-217ENST00000514987 CA9Q16790 459 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 SLC25A52Q3SY17 297 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 KBTBD12Q3ZCT8 623 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 UBXN11Q5T124 520 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 CHSY1Q86X52 802 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 ECHDC2Q86YB7 292 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 IGDCC3Q8IVU1 814 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 ADGRF2Q8IZF7 708 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 MTBPQ96DY7 904 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 APOPT1Q96IL0 206 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 APOL6Q9BWW8 343 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 B3GNT5Q9BYG0 378 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 CXCL16Q9H2A7 254 aa15.41■□□□□ 0.06
NUP54-217ENST00000514987 ZC3H7BQ9UGR2 993 aaKnown RBP15.41■□□□□ 0.06
NUP54-217ENST00000514987 SF3B1O75533 1304 aaKnown RBP eCLIP15.4■□□□□ 0.062e-6■■■■■ 120.6
NUP54-217ENST00000514987 LPXNO60711 386 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 DAB1O75553 588 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 STK10O94804 968 aaKnown RBP15.4■□□□□ 0.06
NUP54-217ENST00000514987 FGFR1P11362 822 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 LCP1P13796 627 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 CCDC130P13994 396 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 CCNB1P14635 433 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 AKAP5P24588 427 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 LRPAP1P30533 357 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 FDFT1P37268 417 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 CYS1Q717R9 158 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 LRRC6Q86X45 466 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 TRIM42Q8IWZ5 723 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 TCP10LQ8TDR4 215 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 KCTD13Q8WZ19 329 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 KLHL29Q96CT2 875 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 CSPG4P5Q96PW8 444 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 LRRC37BQ96QE4 947 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 RAB3IPQ96QF0 476 aaPredicted RBP15.4■□□□□ 0.06
NUP54-217ENST00000514987 DUSP16Q9BY84 665 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 ETNK1Q9HBU6 452 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 POPDC2Q9HBU9 364 aa15.4■□□□□ 0.06
NUP54-217ENST00000514987 C17orf102A2RUQ5 167 aa15.39■□□□□ 0.05
NUP54-217ENST00000514987 H3BRJ5 948 aa15.39■□□□□ 0.05
NUP54-217ENST00000514987 KPNA6O60684 536 aa15.39■□□□□ 0.05
NUP54-217ENST00000514987 HNRNPCL1O60812 293 aaKnown RBP15.39■□□□□ 0.05
NUP54-217ENST00000514987 APRTP07741 180 aa15.39■□□□□ 0.05
NUP54-217ENST00000514987 SNRPAP09012 282 aaKnown RBP15.39■□□□□ 0.05
NUP54-217ENST00000514987 ZNF865P0CJ78 1059 aaPredicted RBP15.39■□□□□ 0.05
NUP54-217ENST00000514987 MLNP12872 115 aa15.39■□□□□ 0.05
NUP54-217ENST00000514987 MAGEA3P43357 314 aa15.39■□□□□ 0.05
NUP54-217ENST00000514987 SERPINB9P50453 376 aa15.39■□□□□ 0.05
NUP54-217ENST00000514987 SEMA5AQ13591 1074 aa15.39■□□□□ 0.05
NUP54-217ENST00000514987 HEATR6Q6AI08 1181 aaKnown RBP15.39■□□□□ 0.05
NUP54-217ENST00000514987 CAND1Q86VP6 1230 aaKnown RBP15.39■□□□□ 0.05
NUP54-217ENST00000514987 B3GALNT2Q8NCR0 500 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms