RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 CA12O43570 354 aa5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 FSHBP01225 129 aa5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 DLDP09622 509 aaKnown RBP5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 CXCR5P32302 372 aa5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 DIO1P49895 249 aa5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 EEFSECP57772 596 aaKnown RBP5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 ST3GAL2Q16842 350 aa5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 RNASE12Q5GAN4 147 aaKnown RBP5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 MRGPRGQ86SM5 289 aa5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 RASAL3Q86YV0 1011 aa5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 SIRT6Q8N6T7 355 aa5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 SPATA5Q8NB90 893 aa5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 ABHD11Q8NFV4 315 aa5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 SCAMP5Q8TAC9 235 aa5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 TRAPPC12Q8WVT3 735 aa5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 MACROD1Q9BQ69 325 aa5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 POLR3GLQ9BT43 218 aa5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 PCED1AQ9H1Q7 454 aa5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 IL17RBQ9NRM6 502 aa5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 AMFRQ9UKV5 643 aa5.96□□□□□ -1.46
HMGCS1-207ENST00000514610 FAM90A18PA6NE21 464 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 FAM90A16PA6NEW6 464 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 FAM90A9PA6NNJ1 464 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 FAM90A5PA8MXJ8 464 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 QSOX1O00391 747 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 RAMP2O60895 175 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 RPP40O75818 363 aaKnown RBP5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 ACTL6BO94805 426 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 FGAP02671 866 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 ITGA2BP08514 1039 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 NPSP0C0P6 89 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 FAM163BP0C2L3 166 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 FAM90A15PP0C7V4 464 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 FAM90A14PP0C7W9 464 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 ADRA1DP25100 572 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 AKT1P31749 480 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 SUMO2P61956 95 aaKnown RBP5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 CYP4F2P78329 520 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 COL10A1Q03692 680 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 KCNJ12Q14500 433 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 ZRSR2Q15696 482 aaKnown RBP5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 BTBD16Q32M84 506 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 PRR16Q569H4 304 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 AARS2Q5JTZ9 985 aaKnown RBP5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 L1TD1Q5T7N2 865 aaKnown RBP5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 RINT1Q6NUQ1 792 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 CLASRPQ8N2M8 674 aaKnown RBP5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 OTUD7AQ8TE49 926 aaPredicted RBP5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 TBC1D20Q96BZ9 403 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 LTV1Q96GA3 475 aaPredicted RBP5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 PABPC3Q9H361 631 aaKnown RBP5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 SYNPO2LQ9H987 977 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 SAP30LQ9HAJ7 183 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 LUZP4Q9P127 313 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 HERC5Q9UII4 1024 aaKnown RBP5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 ADAM21Q9UKJ8 722 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 GPR52Q9Y2T5 361 aa5.95□□□□□ -1.46
HMGCS1-207ENST00000514610 GXYLT2A0PJZ3 443 aa5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 GCOM1H8Y6P7 765 aaPredicted RBP5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 CTIFO43310 598 aaKnown RBP5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 ORC4O43929 436 aa5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 CER1O95813 267 aa5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 SLPIP03973 132 aa5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 LMAN2Q12907 356 aa5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 TIGD6Q17RP2 521 aa5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 PCID2Q5JVF3 399 aa5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 TSTD2Q5T7W7 516 aa5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 OLFML1Q6UWY5 402 aa5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 NAPRTQ6XQN6 538 aa5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 SLC44A2Q8IWA5 706 aaPredicted RBP5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 SIMC1Q8NDZ2 872 aa5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 MYRIPQ8NFW9 859 aa5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 BBC3Q96PG8 261 aaPredicted RBP5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 RTKNQ9BST9 563 aa5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 PRDM8Q9NQV8 689 aa5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 VPS45Q9NRW7 570 aa5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 MGAT4CQ9UBM8 478 aa5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 SRP68Q9UHB9 627 aaKnown RBP5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 ENTPD2Q9Y5L3 495 aa5.94□□□□□ -1.46
HMGCS1-207ENST00000514610 SUV39H1O43463 412 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 PRAMEF2O60811 474 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 MBPP02686 304 aaPredicted RBP5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 MYCLP12524 364 aaPredicted RBP5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 ALADP13716 330 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 GDF5P43026 501 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 CACNA2D1P54289 1103 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 DPTQ07507 201 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 BFSP2Q13515 415 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 DNASE1L3Q13609 305 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 PRKG1Q13976 671 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 CSHL1Q14406 222 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 P3H1Q32P28 736 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 TBC1D25Q3MII6 688 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 TRIM60Q495X7 471 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 ZNF362Q5T0B9 420 aaPredicted RBP5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 CCDC144NLQ6NUI1 221 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 KLHL17Q6TDP4 642 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 MTHFD1LQ6UB35 978 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 KIRREL2Q6UWL6 708 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms