RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 ARHGEF26Q96DR7 871 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 CRELD1Q96HD1 420 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 MAP6Q96JE9 813 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 WRNIP1Q96S55 665 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 SEC62Q99442 399 aaKnown RBP7.49□□□□□ -1.21
NIPBL-208ENST00000514335 SH3GL2Q99962 352 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 SPATA16Q9BXB7 569 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 TRIM15Q9C019 465 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 TRIM45Q9H8W5 580 aaPredicted RBP7.49□□□□□ -1.21
NIPBL-208ENST00000514335 ANLNQ9NQW6 1124 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 CNOT6Q9ULM6 557 aaKnown RBP7.49□□□□□ -1.21
NIPBL-208ENST00000514335 RUVBL1Q9Y265 456 aaKnown RBP7.49□□□□□ -1.21
NIPBL-208ENST00000514335 DERAQ9Y315 318 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 NR2E3Q9Y5X4 410 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 A0A1B0GTQ1 180 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 VPS37CA5D8V6 355 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 CIDEAO60543 219 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 ZNF202O95125 648 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 GSTA2P09210 222 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 MYCLP12524 364 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 KRT5P13647 590 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 SLC9A1P19634 815 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 GRIK1P39086 918 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 SLC12A3P55017 1021 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 PTPN11Q06124 597 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 KRT24Q2M2I5 525 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 IDO2Q6ZQW0 420 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 NLRP8Q86W28 1048 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 TCAIMQ8N3R3 496 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 MYCT1Q8N699 235 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 UCMAQ8WVF2 138 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 ADAM33Q9BZ11 813 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 LHX5Q9H2C1 402 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 KCNN2Q9H2S1 579 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 XKR8Q9H6D3 395 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 GAB2Q9UQC2 676 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 GSTTP1A0A1W2PQM5 241 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 TTC26A0AVF1 554 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 PRSS44E7EML9 344 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 DNM1LO00429 736 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 CDH5P33151 784 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 ETV5P41161 510 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 PRKCIP41743 596 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 ZNF280AP59817 542 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 POU6F2P78424 691 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 NRG1Q02297 640 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 C5orf22Q49AR2 442 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 IQSEC1Q6DN90 963 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 CASC4Q6P4E1 433 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 RUFY4Q6ZNE9 571 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 MIER3Q7Z3K6 550 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 TTLL11Q8NHH1 800 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 SEPT8Q92599 483 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 CELF1Q92879 486 aaKnown RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 CDK19Q9BWU1 502 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 PARD6GQ9BYG4 376 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 NAT10Q9H0A0 1025 aaKnown RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 SARS2Q9NP81 518 aaKnown RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 PDLIM7Q9NR12 457 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 DNAJB4Q9UDY4 337 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 CHORDC1Q9UHD1 332 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 NOVA2Q9UNW9 492 aaKnown RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 C19orf53Q9UNZ5 99 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 VWA7Q9Y334 891 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 NAALAD2Q9Y3Q0 740 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 EDC4Q6P2E9 1401 aaKnown RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 GSAPA4D1B5 854 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 hCG_2039718K7EN88 272 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 PDE2AO00408 941 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 DCLK1O15075 740 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 CLOCKO15516 846 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 MED24O75448 989 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 GCATO75600 419 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 PRDM1O75626 825 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 SCAF4O95104 1147 aaKnown RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 PROCP04070 461 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 FGF4P08620 206 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 NFICP08651 508 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 DBTP11182 482 aaKnown RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 ITGAXP20702 1163 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 CYP3A5P20815 502 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 MAPK3P27361 379 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 PPP2R1AP30153 589 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 RFC1P35251 1148 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-208ENST00000514335 GUCY2DQ02846 1103 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 TAP2Q03519 686 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 ITKQ08881 620 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 SLFN5Q08AF3 891 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 LPIN1Q14693 890 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 SPRED3Q2MJR0 410 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 C6orf163Q5TEZ5 329 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 ERICH5Q6P6B1 374 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 Q6ZNX1 250 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 UNC13DQ70J99 1090 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 PEX26Q7Z412 305 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 FAM160B2Q86V87 743 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 NELFCDQ8IXH7 590 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 ADGRG5Q8IZF4 528 aa7.48□□□□□ -1.21
NIPBL-208ENST00000514335 CCAR2Q8N163 923 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms