RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 HOXB2P14652 356 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 TRIM21P19474 475 aaKnown RBP12.86□□□□□ -0.35
SNHG4-208ENST00000514110 NTSR1P30989 418 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 PLA2G4AP47712 749 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 NOVA1P51513 510 aaKnown RBP12.86□□□□□ -0.35
SNHG4-208ENST00000514110 MCCD1P59942 119 aaPredicted RBP12.86□□□□□ -0.35
SNHG4-208ENST00000514110 SHC2P98077 582 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 ENPEPQ07075 957 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 GOLGA8FQ08AF8 430 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 GOLGA8DPQ0D2H9 430 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 ADAM9Q13443 819 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 ZNF394Q53GI3 561 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 C10orf120Q5SQS8 335 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 DAB2IPQ5VWQ8 1189 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 KLHDC10Q6PID8 442 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 Q6ZNB5 142 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 TOGARAM2Q6ZUX3 1019 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 CCDC186Q7Z3E2 898 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 TRMT11Q7Z4G4 463 aaKnown RBP12.86□□□□□ -0.35
SNHG4-208ENST00000514110 SCD5Q86SK9 330 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 BHMTQ93088 406 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 ERLEC1Q96DZ1 483 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 EEF2KMTQ96G04 330 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 XPO6Q96QU8 1125 aaKnown RBP12.86□□□□□ -0.35
SNHG4-208ENST00000514110 DUSP16Q9BY84 665 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 TMEM8AQ9HCN3 771 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 MARK1Q9P0L2 795 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 WDR35Q9P2L0 1181 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 DNMT3LQ9UJW3 386 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 NAGPAQ9UK23 515 aa12.86□□□□□ -0.35
SNHG4-208ENST00000514110 ATXN2Q99700 1313 aaKnown RBP12.86□□□□□ -0.35
SNHG4-208ENST00000514110 A0A1W2PQ27 194 aa12.85□□□□□ -0.35
SNHG4-208ENST00000514110 A0A1W2PQ64 194 aa12.85□□□□□ -0.35
SNHG4-208ENST00000514110 A0A1W2PQD8 194 aa12.85□□□□□ -0.35
SNHG4-208ENST00000514110 STC2O76061 302 aa12.85□□□□□ -0.35
SNHG4-208ENST00000514110 ZNF202O95125 648 aa12.85□□□□□ -0.35
SNHG4-208ENST00000514110 RPL13P26373 211 aaKnown RBP12.85□□□□□ -0.35
SNHG4-208ENST00000514110 BYSLQ13895 437 aaKnown RBP12.85□□□□□ -0.35
SNHG4-208ENST00000514110 TRIM61Q5EBN2 209 aa12.85□□□□□ -0.35
SNHG4-208ENST00000514110 SH3PXD2AQ5TCZ1 1133 aa12.85□□□□□ -0.35
SNHG4-208ENST00000514110 KRT39Q6A163 491 aa12.85□□□□□ -0.35
SNHG4-208ENST00000514110 NUDT18Q6ZVK8 323 aa12.85□□□□□ -0.35
SNHG4-208ENST00000514110 SYT12Q8IV01 421 aa12.85□□□□□ -0.35
SNHG4-208ENST00000514110 SMYD4Q8IYR2 804 aaPredicted RBP12.85□□□□□ -0.35
SNHG4-208ENST00000514110 DEFB119Q8N690 84 aa12.85□□□□□ -0.35
SNHG4-208ENST00000514110 CCDC150Q8NCX0 1101 aa12.85□□□□□ -0.35
SNHG4-208ENST00000514110 HEXIM2Q96MH2 286 aaKnown RBP12.85□□□□□ -0.35
SNHG4-208ENST00000514110 SCAND2PQ9GZW5 306 aaPredicted RBP12.85□□□□□ -0.35
SNHG4-208ENST00000514110 CD248Q9HCU0 757 aa12.85□□□□□ -0.35
SNHG4-208ENST00000514110 PLK2Q9NYY3 685 aa12.85□□□□□ -0.35
SNHG4-208ENST00000514110 CALCOCO1Q9P1Z2 691 aa12.85□□□□□ -0.35
SNHG4-208ENST00000514110 EVLQ9UI08 416 aaPredicted RBP12.85□□□□□ -0.35
SNHG4-208ENST00000514110 USP3Q9Y6I4 520 aa12.85□□□□□ -0.35
SNHG4-208ENST00000514110 CHD8Q9HCK8 2581 aa12.85□□□□□ -0.35
SNHG4-208ENST00000514110 CNOT1A5YKK6 2376 aaKnown RBP12.85□□□□□ -0.35
SNHG4-208ENST00000514110 FRYQ5TBA9 3013 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 MYO18AQ92614 2054 aaKnown RBP12.84□□□□□ -0.35
SNHG4-208ENST00000514110 KLKB1P03952 638 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 CISD3P0C7P0 127 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 NDUFV2P19404 249 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 ITPKAP23677 461 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 GTF2H1P32780 548 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 PSEN1P49768 467 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 RAD23BP54727 409 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 RPL6Q02878 288 aaKnown RBP12.84□□□□□ -0.35
SNHG4-208ENST00000514110 EDRF1Q3B7T1 1238 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 UAP1L1Q3KQV9 507 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 SPDYCQ5MJ68 293 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 LYSMD4Q5XG99 296 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 KIAA1211LQ6NV74 962 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 CHPFQ8IZ52 775 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 ZNF276Q8N554 614 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 SLC4A11Q8NBS3 891 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 IPO4Q8TEX9 1081 aaKnown RBP12.84□□□□□ -0.35
SNHG4-208ENST00000514110 TATDN2Q93075 761 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 ARID3AQ99856 593 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 GDPD2Q9HCC8 539 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 FSCN3Q9NQT6 498 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 CLIC5Q9NZA1 410 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 PILRBQ9UKJ0 227 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 RAD54BQ9Y620 910 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 ZFHX4Q86UP3 3567 aa12.84□□□□□ -0.35
SNHG4-208ENST00000514110 MAP1BP46821 2468 aaKnown RBP12.83□□□□□ -0.36
SNHG4-208ENST00000514110 CACNA1BQ00975 2339 aa12.83□□□□□ -0.36
SNHG4-208ENST00000514110 HMBSP08397 361 aa12.83□□□□□ -0.36
SNHG4-208ENST00000514110 RALAP11233 206 aa12.83□□□□□ -0.36
SNHG4-208ENST00000514110 MAPK8P45983 427 aa12.83□□□□□ -0.36
SNHG4-208ENST00000514110 DGKGP49619 791 aa12.83□□□□□ -0.36
SNHG4-208ENST00000514110 MXI1P50539 228 aa12.83□□□□□ -0.36
SNHG4-208ENST00000514110 ZNF252P-AS1Q0IIN9 211 aa12.83□□□□□ -0.36
SNHG4-208ENST00000514110 EFEMP1Q12805 493 aa12.83□□□□□ -0.36
SNHG4-208ENST00000514110 LMAN2Q12907 356 aa12.83□□□□□ -0.36
SNHG4-208ENST00000514110 PNOCQ13519 176 aa12.83□□□□□ -0.36
SNHG4-208ENST00000514110 PEAR1Q5VY43 1037 aaPredicted RBP12.83□□□□□ -0.36
SNHG4-208ENST00000514110 SDE2Q6IQ49 451 aa12.83□□□□□ -0.36
SNHG4-208ENST00000514110 SLC23A3Q6PIS1 610 aa12.83□□□□□ -0.36
SNHG4-208ENST00000514110 FBXL13Q8NEE6 735 aa12.83□□□□□ -0.36
SNHG4-208ENST00000514110 TMEM176AQ96HP8 235 aa12.83□□□□□ -0.36
SNHG4-208ENST00000514110 GABRG3Q99928 467 aa12.83□□□□□ -0.36
SNHG4-208ENST00000514110 NUSAP1Q9BXS6 441 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms