RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 TMEM109Q9BVC6 243 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 MAGEB5Q9BZ81 275 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 DMAP1Q9NPF5 467 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 STXBP5LQ9Y2K9 1186 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 TMX2Q9Y320 296 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 ABCC6O95255 1503 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 M0R3G1 203 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 ALOX15BO15296 676 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 ZNF23P17027 643 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 RGS2P41220 211 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 PTPN11Q06124 597 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 SHROOM1Q2M3G4 852 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 EFCAB12Q6NXP0 572 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 TMCO5AQ8N6Q1 288 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 ZNF555Q8NEP9 628 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 ACSS3Q9H6R3 686 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 NKX1-2Q9UD57 310 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 ADGRA2Q96PE1 1338 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 MYH8P13535 1937 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 H0YGN5 161 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 GOLGA8TH3BQL2 631 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 DEAF1O75398 565 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 LYPLA1O75608 230 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 ESRRBO95718 433 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 PSMA4P25789 261 aaKnown RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 CNTFP26441 200 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 HSD17B4P51659 736 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 CCNJLQ8IV13 435 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 FAM81AQ8TBF8 368 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 USP6NLQ92738 828 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 DCPSQ96C86 337 aaKnown RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 MARK4Q96L34 752 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 RNPEPQ9H4A4 650 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 SP110Q9HB58 689 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 AP4S1Q9Y587 144 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 NFS1Q9Y697 457 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 APOC4-APOC2K7ER74 178 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 MAFGO15525 162 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 PMPCBO75439 489 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 IL18RAPO95256 599 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 APOC2P02655 101 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 HMGCRP04035 888 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 TPP2P29144 1249 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 GNL1P36915 607 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 MRPS15P82914 257 aaKnown RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 MMRN1Q13201 1228 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 GLRA4Q5JXX5 417 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 ARMC3Q5W041 872 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 BHLHE22Q8NFJ8 381 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 RDM1Q8NG50 284 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 FAM136AQ96C01 138 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 GPRASP2Q96D09 838 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 TNIP3Q96KP6 325 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 SIX2Q9NPC8 291 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 TMEM59LQ9UK28 342 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 AP4E1Q9UPM8 1137 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 PPME1Q9Y570 386 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 ROBO3Q96MS0 1386 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 TCRBV9S1A1TA0A576 114 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 C16orf96A6NNT2 1141 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 E5RI56 91 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 TPP1O14773 563 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 NPTXRO95502 500 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 TXNP10599 105 aaKnown RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 NFKBIAP25963 317 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 MSX2P35548 267 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 MGAT5Q09328 741 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 MPP3Q13368 585 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 GSTA3Q16772 222 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 SLC9A9Q8IVB4 645 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 RBM15BQ8NDT2 890 aaKnown RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 ULK4Q96C45 1275 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 RMND5BQ96G75 393 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 ZFRQ96KR1 1074 aaKnown RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 PIF1Q9H611 641 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 SLC5A4Q9NY91 659 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 PLA2G4CQ9UP65 541 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 ATF5Q9Y2D1 282 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-209ENST00000513761 WASF2Q9Y6W5 498 aa7.99□□□□□ -1.13
CLCN3-209ENST00000513761 TBC1D4O60343 1298 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 FDX1P10109 184 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 TCF7P36402 384 aaPredicted RBP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 CCDC81Q6ZN84 652 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 ATPAF2Q8N5M1 289 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 FAM193BQ96PV7 902 aaPredicted RBP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 PDCD2LQ9BRP1 358 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 CADM1Q9BY67 442 aaKnown RBP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 LRRC40Q9H9A6 602 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 H0Y626 953 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 M0QYT0 321 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 DAB1O75553 588 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 FAM155BO75949 473 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 CSPG5O95196 566 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 TRIM16O95361 564 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 CYP3A4P08684 503 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 CXCL8P10145 99 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 TPH1P17752 444 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 SERPINB10P48595 397 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 NEK2P51955 445 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms