RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 EFHBQ8N7U6 833 aa11.34□□□□□ -0.59
PFDN1-204ENST00000512707 LRRC57Q8N9N7 239 aa11.34□□□□□ -0.59
PFDN1-204ENST00000512707 NDRG1Q92597 394 aaKnown RBP11.34□□□□□ -0.59
PFDN1-204ENST00000512707 EDEM1Q92611 657 aa11.34□□□□□ -0.59
PFDN1-204ENST00000512707 MRPS31Q92665 395 aaKnown RBP11.34□□□□□ -0.59
PFDN1-204ENST00000512707 PIWIL1Q96J94 861 aaKnown RBP11.34□□□□□ -0.59
PFDN1-204ENST00000512707 CFAP57Q96MR6 1250 aa11.34□□□□□ -0.59
PFDN1-204ENST00000512707 NAPGQ99747 312 aaPredicted RBP11.34□□□□□ -0.59
PFDN1-204ENST00000512707 CORO1BQ9BR76 489 aa11.34□□□□□ -0.59
PFDN1-204ENST00000512707 DDX23Q9BUQ8 820 aaKnown RBP11.34□□□□□ -0.59
PFDN1-204ENST00000512707 IGFLR1Q9H665 355 aa11.34□□□□□ -0.59
PFDN1-204ENST00000512707 SALL4Q9UJQ4 1053 aa11.34□□□□□ -0.59
PFDN1-204ENST00000512707 USTQ9Y2C2 406 aa11.34□□□□□ -0.59
PFDN1-204ENST00000512707 ALG6Q9Y672 507 aa11.34□□□□□ -0.59
PFDN1-204ENST00000512707 CCDC195A0A1B0GUA6 201 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 CCDC66A2RUB6 948 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 M0QYT0 321 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 ZNF197O14709 1029 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 PRPSAP2O60256 369 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 FTCDO95954 541 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 KRT7P08729 469 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 RARGP13631 454 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 TNNT1P13805 278 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 HMGA1P17096 107 aaKnown RBP11.33□□□□□ -0.6
PFDN1-204ENST00000512707 COMTP21964 271 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 IGFBP4P22692 258 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 RDXP35241 583 aaKnown RBP11.33□□□□□ -0.6
PFDN1-204ENST00000512707 PCK1P35558 622 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 KPNA1P52294 538 aaPredicted RBP11.33□□□□□ -0.6
PFDN1-204ENST00000512707 ATP11AP98196 1134 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 DEUP1Q05D60 604 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 RPS6KA1Q15418 735 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 CDO1Q16878 200 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 CCDC14Q49A88 953 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 TCEAL5Q5H9L2 206 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 C10orf120Q5SQS8 335 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 HECTD3Q5T447 861 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 ZFYVE27Q5T4F4 411 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 SNX30Q5VWJ9 437 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 HFE2Q6ZVN8 426 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 SLFN11Q7Z7L1 901 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 RHOT1Q8IXI2 618 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 SLC35F6Q8N357 371 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 CMASQ8NFW8 434 aaPredicted RBP11.33□□□□□ -0.6
PFDN1-204ENST00000512707 KCNV2Q8TDN2 545 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 FAM172AQ8WUF8 416 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 SMG7Q92540 1137 aaKnown RBP11.33□□□□□ -0.6
PFDN1-204ENST00000512707 RNF34Q969K3 372 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 BTBD6Q96KE9 485 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 SERPINB11Q96P15 392 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 IRX2Q9BZI1 471 aaPredicted RBP11.33□□□□□ -0.6
PFDN1-204ENST00000512707 PRKD2Q9BZL6 878 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 TRIM7Q9C029 511 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 SMOC2Q9H3U7 446 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 DDIT4Q9NX09 232 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 DNAI1Q9UI46 699 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 ZMYM5Q9UJ78 669 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 NAALADL1Q9UQQ1 740 aa11.33□□□□□ -0.6
PFDN1-204ENST00000512707 ZNF840PA6NDX5 716 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 PSTPIP1O43586 416 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 TLR5O60602 858 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 RFPL2O75678 378 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 ZDHHC11BP0C7U3 371 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 SLC2A3P11169 496 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 MYL4P12829 197 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 HOXB8P17481 243 aaPredicted RBP11.32□□□□□ -0.6
PFDN1-204ENST00000512707 PFKLP17858 780 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 DDX6P26196 483 aaKnown RBP eCLIP11.32□□□□□ -0.66e-11■■■■■ 165.9
PFDN1-204ENST00000512707 GABRR2P28476 465 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 ATP5C1P36542 298 aaKnown RBP11.32□□□□□ -0.6
PFDN1-204ENST00000512707 CETN2P41208 172 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 HYAL1Q12794 435 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 NME3Q13232 169 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 MTA1Q13330 715 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 GRIN2CQ14957 1233 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 ARL13BQ3SXY8 428 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 LRRC38Q5VT99 294 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 CC2D1AQ6P1N0 951 aaPredicted RBP11.32□□□□□ -0.6
PFDN1-204ENST00000512707 MSANTD2Q6P1R3 559 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 SCYL2Q6P3W7 929 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 SYT10Q6XYQ8 523 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 BHLHA9Q7RTU4 235 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 SCD5Q86SK9 330 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 ZNF276Q8N554 614 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 KIF18AQ8NI77 898 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 DQX1Q8TE96 717 aaKnown RBP11.32□□□□□ -0.6
PFDN1-204ENST00000512707 ZNF592Q92610 1267 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 KHSRPQ92945 711 aaKnown RBP eCLIP11.32□□□□□ -0.68e-6■■■□□ 18.5
PFDN1-204ENST00000512707 TBCBQ99426 244 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 NPY6RQ99463 290 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 ATXN3LQ9H3M9 355 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.32□□□□□ -0.6
PFDN1-204ENST00000512707 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.32□□□□□ -0.62e-9■□□□□ 8.9
PFDN1-204ENST00000512707 DNMT3LQ9UJW3 386 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 CLUHO75153 1309 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 PLXNA3P51805 1871 aa11.32□□□□□ -0.6
PFDN1-204ENST00000512707 TRANK1O15050 2925 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 SYNJ2BP-COX16A0A087WUM0 186 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 SOBPA7XYQ1 873 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 TRUB2O95900 331 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms