RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 CHRDQ9H2X0 955 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 NLRC4Q9NPP4 1024 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 TJP2Q9UDY2 1190 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 SFMBT1Q9UHJ3 866 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 LSM7Q9UK45 103 aaKnown RBP14.64□□□□□ -0.07
DDX41-212ENST00000511040 SIK3Q9Y2K2 1263 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 ARIH1Q9Y4X5 557 aaPredicted RBP14.64□□□□□ -0.07
DDX41-212ENST00000511040 MYOFQ9NZM1 2061 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 E5RJQ4 531 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 F8VZ95 297 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 TRDMT1O14717 391 aaKnown RBP14.63□□□□□ -0.07
DDX41-212ENST00000511040 GFPT2O94808 682 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 ADH1CP00326 375 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 KLKB1P03952 638 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 ADH5P11766 374 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 KRT9P35527 623 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 SLC6A11P48066 632 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 AMPD2Q01433 879 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 GRSF1Q12849 480 aaKnown RBP eCLIP14.63□□□□□ -0.07
DDX41-212ENST00000511040 PDCLQ13371 301 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 GAS6Q14393 721 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 IQCB1Q15051 598 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 ZSCAN23Q3MJ62 389 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 TAF3Q5VWG9 929 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 HTR3DQ70Z44 454 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 C12orf40Q86WS4 652 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 TMEM25Q86YD3 366 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 FMNL3Q8IVF7 1028 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 MAML2Q8IZL2 1156 aaPredicted RBP14.63□□□□□ -0.07
DDX41-212ENST00000511040 ZNF276Q8N554 614 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 KIAA1958Q8N8K9 716 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 C1orf131Q8NDD1 294 aaKnown RBP14.63□□□□□ -0.07
DDX41-212ENST00000511040 CD101Q93033 1021 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 FAM122AQ96E09 287 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 PHOX2BQ99453 314 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 SLC4A5Q9BY07 1137 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 STK33Q9BYT3 514 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 CBX8Q9HC52 389 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 STRIP2Q9ULQ0 834 aa14.63□□□□□ -0.07
DDX41-212ENST00000511040 LRRC10BA6NIK2 292 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 TEX33O43247 280 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 MSI1O43347 362 aaKnown RBP14.62□□□□□ -0.07
DDX41-212ENST00000511040 LAMTOR5O43504 91 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 FBXO21O94952 628 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 LTFP02788 710 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 CYP11B1P15538 503 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 CORO1AP31146 461 aaKnown RBP14.62□□□□□ -0.07
DDX41-212ENST00000511040 OPRD1P41143 372 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 MAGEA9P43362 315 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 ACADSBP45954 432 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 RPL34P49207 117 aaKnown RBP14.62□□□□□ -0.07
DDX41-212ENST00000511040 BPIFB4P59827 614 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 CCINQ13939 588 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 ANO4Q32M45 955 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 DGKKQ5KSL6 1271 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 TSSK4Q6SA08 328 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 Q6ZNB5 142 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 TPGS1Q6ZTW0 290 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 LUZP1Q86V48 1076 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 SCML4Q8N228 414 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 NAT16Q8N8M0 369 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 NEK11Q8NG66 645 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 IRGQQ8WZA9 623 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 EZH1Q92800 747 aaPredicted RBP14.62□□□□□ -0.07
DDX41-212ENST00000511040 BHMTQ93088 406 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 FAM149B1Q96BN6 582 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 PDCL3Q9H2J4 239 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 PCDHGC3Q9UN70 934 aa14.62□□□□□ -0.07
DDX41-212ENST00000511040 CACNA1IQ9P0X4 2223 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 ANTXRLA6NF34 631 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 PAPSS1O43252 624 aaPredicted RBP14.61□□□□□ -0.07
DDX41-212ENST00000511040 FYNP06241 537 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 PLA2G5P39877 138 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 COG7P83436 770 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 SATB1Q01826 763 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 CSTF1Q05048 431 aaKnown RBP14.61□□□□□ -0.07
DDX41-212ENST00000511040 KDSRQ06136 332 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 MESP2Q0VG99 397 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 MEA1Q16626 185 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 SKOR2Q2VWA4 1001 aaPredicted RBP14.61□□□□□ -0.07
DDX41-212ENST00000511040 PKN3Q6P5Z2 889 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 TMEM110Q86TL2 294 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 NOP9Q86U38 636 aaKnown RBP14.61□□□□□ -0.07
DDX41-212ENST00000511040 DENND1CQ8IV53 801 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 SFTPA1Q8IWL2 248 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 STK32AQ8WU08 396 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 SLC20A1Q8WUM9 679 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 GOLGA1Q92805 767 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 OTUB2Q96DC9 234 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 PPP1R13BQ96KQ4 1090 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 CPXM1Q96SM3 734 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 LHX5Q9H2C1 402 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 SPHK2Q9NRA0 654 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 ABCC13Q9NSE7 274 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 OLA1Q9NTK5 396 aaKnown RBP14.61□□□□□ -0.07
DDX41-212ENST00000511040 C2orf42Q9NWW7 574 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 NAALADL1Q9UQQ1 740 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 ATG2BQ96BY7 2078 aa14.61□□□□□ -0.07
DDX41-212ENST00000511040 RNF40O75150 1001 aa14.6□□□□□ -0.07
DDX41-212ENST00000511040 ERBB2P04626 1255 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms