RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 MSANTD2Q6P1R3 559 aa12.31□□□□□ -0.44
HMGXB3-203ENST00000510472 BEND5Q7L4P6 421 aa12.31□□□□□ -0.44
HMGXB3-203ENST00000510472 ALYREFQ86V81 257 aaKnown RBP12.31□□□□□ -0.44
HMGXB3-203ENST00000510472 SCUBE3Q8IX30 993 aa12.31□□□□□ -0.44
HMGXB3-203ENST00000510472 SIX6OS1Q8N1H7 587 aa12.31□□□□□ -0.44
HMGXB3-203ENST00000510472 SYNPOQ8N3V7 929 aa12.31□□□□□ -0.44
HMGXB3-203ENST00000510472 TTC16Q8NEE8 873 aa12.31□□□□□ -0.44
HMGXB3-203ENST00000510472 CLEC4CQ8WTT0 213 aa12.31□□□□□ -0.44
HMGXB3-203ENST00000510472 EZH1Q92800 747 aaPredicted RBP12.31□□□□□ -0.44
HMGXB3-203ENST00000510472 P2RY13Q9BPV8 354 aa12.31□□□□□ -0.44
HMGXB3-203ENST00000510472 IER2Q9BTL4 223 aa12.31□□□□□ -0.44
HMGXB3-203ENST00000510472 NACA2Q9H009 215 aa12.31□□□□□ -0.44
HMGXB3-203ENST00000510472 RTN4Q9NQC3 1192 aaKnown RBP12.31□□□□□ -0.44
HMGXB3-203ENST00000510472 ABCC13Q9NSE7 274 aa12.31□□□□□ -0.44
HMGXB3-203ENST00000510472 RBM12Q9NTZ6 932 aaKnown RBP12.31□□□□□ -0.44
HMGXB3-203ENST00000510472 MARCH2Q9P0N8 246 aa12.31□□□□□ -0.44
HMGXB3-203ENST00000510472 SH3BP1Q9Y3L3 701 aa12.31□□□□□ -0.44
HMGXB3-203ENST00000510472 DAAM1Q9Y4D1 1078 aa12.31□□□□□ -0.44
HMGXB3-203ENST00000510472 KMT2EQ8IZD2 1858 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 H0Y858 1186 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 PIK3R2O00459 728 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 HOXC11O43248 304 aaPredicted RBP12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 TPM2P07951 284 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 CHRM1P11229 460 aaPredicted RBP12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 CYP11B1P15538 503 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 POLR2FP61218 127 aaKnown RBP12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 UBXN1Q04323 297 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 EFEMP1Q12805 493 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 MTAPQ13126 283 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 PDCLQ13371 301 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 RAPGEF1Q13905 1077 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 ZSCAN23Q3MJ62 389 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 LY6G5CQ5SRR4 150 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 BTBD8Q5XKL5 378 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 TMEM25Q86YD3 366 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 MIB1Q86YT6 1006 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 ETFBKMTQ8IXQ9 262 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 PHTF2Q8N3S3 785 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 ANKRD20A12PQ8NF67 263 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 NELL1Q92832 810 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 P2RY11Q96G91 374 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 CPXM1Q96SM3 734 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 IRF2BPLQ9H1B7 796 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 CBX8Q9HC52 389 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 FAM207AQ9NSI2 230 aaPredicted RBP12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 OLA1Q9NTK5 396 aaKnown RBP12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 TJP2Q9UDY2 1190 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 PATJQ8NI35 1801 aa12.3□□□□□ -0.44
HMGXB3-203ENST00000510472 E5RJQ4 531 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 GFRA2O00451 464 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 TEX33O43247 280 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 CAVIN2O95810 425 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 IGLV3-27P01718 113 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 LTFP02788 710 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 IRF1P10914 325 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 TDGF1P13385 188 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 DRD1P21728 446 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 EIF2DP41214 584 aaKnown RBP12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 MESP2Q0VG99 397 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 GRSF1Q12849 480 aaKnown RBP eCLIP12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 EIF4EBP2Q13542 120 aaPredicted RBP12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 LRRC32Q14392 662 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 Q6ZS52 159 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 NOP9Q86U38 636 aaKnown RBP12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 C12orf40Q86WS4 652 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 FAM217AQ8IXS0 508 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 SPEM1Q8N4L4 309 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 EPS8L1Q8TE68 723 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 EDEM1Q92611 657 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 CD101Q93033 1021 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 NAP1L5Q96NT1 182 aaPredicted RBP12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 MIS12Q9H081 205 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 PRMT8Q9NR22 394 aaPredicted RBP12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 SPHK2Q9NRA0 654 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 MARK1Q9P0L2 795 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 SFMBT1Q9UHJ3 866 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 RASAL2Q9UJF2 1139 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 STOML2Q9UJZ1 356 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 NOCTQ9UK39 431 aaKnown RBP12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 FBXO4Q9UKT5 387 aa12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 AGO1Q9UL18 857 aaKnown RBP12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 HBS1LQ9Y450 684 aaKnown RBP12.29□□□□□ -0.44
HMGXB3-203ENST00000510472 CACNA1IQ9P0X4 2223 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 A0A1B0GTH6 734 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 SLC12A8A0AV02 714 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 K7EQS6 105 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 SART1O43290 800 aaKnown RBP12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 PAPSS2O95340 614 aaPredicted RBP12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 ADH1CP00326 375 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 EGFP01133 1207 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 ADH5P11766 374 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 KRT9P35527 623 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 SOX5P35711 763 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 SLC6A11P48066 632 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 GAD2Q05329 585 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 GOLGA8FQ08AF8 430 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 GOLGA8DPQ0D2H9 430 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 NR1I3Q14994 352 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 TAF5Q15542 800 aa12.28□□□□□ -0.44
HMGXB3-203ENST00000510472 ZNF528Q3MIS6 628 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms